NONHSAT034472

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT034472

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2131 nt

Genomic location

chr13-:79886132..79888263

Exon number

2

Exons

79886132..79887492,79887498..79888263

Genome context

Sequence
000001 AATTACTTAT AAAGAATCTG ATTAAATCTC ATCCTAAATA TGTAGCCACA ATATCTTTTT TATAATGGGA CTATAAGAAA 000080
000081 TGTTTGCACT TAGTTTCTGA GTATTCCTTC ATAGATTCTC AGGAGGCATT TAAAAAGTTG GAAGCTATAC TTGGTAGTAA 000160
000161 CTATATTAGA AAAGTCCAAT TGACACTGAT TTTTATTCAC CCTTGTTTTA TTTTTATCCA GCCATACTAC CTTTATCACT 000240
000241 TTTTTTTTTT TTTTGGTGCA AAGCTTAACA TTCTGCAAAC TTTTTTTCCC CTTGAGTATG CATTGCATTT GTCATGAAGA 000320
000321 GTAAAAAGAA TGTAATAAAC ACATCAGTCA TAATGTAAAT TAACTGTTTT GATCCACATT GGTTGGATAC AGCATGGTTA 000400
000401 ATTCTAGGCT TGGTTAAAAA TACATAATTT GGAAAGTCTT CTAATATTTT AAAGACCTAG TAGTTTACAA GGCCTTTTTT 000480
000481 TGTTGTTGTT GTTAGACTTT TGGTTCACAT TTACAAACTA GCCACAGGGT GTTCATAAAT ATTTCCCCAA ATTAGTTGAG 000560
000561 TATTTTTAAT TGTAAACAAA GAATTTTCTG CCCCTACTAC ACTGGTTTAC TGCTAGGGTA AAGACCATTG TCTGAAGACA 000640
000641 CTAAACTTGG TGTTAACAGT GTTGATTGTT TAATGGATAT GGACTACATG CCACTACCTG CAACTTTGTC ATCCTGGAGT 000720
000721 TTTTATTTGG TTTGGTTTGA TTTTTCGTTT TTTGCTTTTA AAATTCAAAG CAAAACAAAA TTGAAGATAC CATTGAGAAT 000800
000801 CAGAATTCAA GATGACTTGA TTCTCACTAA GATCACTGCG CTTTTTAAAA ATTGCTTTGA GATCTAGTCA GTTACATATT 000880
000881 TAAAATCCCC GTGTTGATTA GAGATAAGGT TTTCATTATT TTATTTTCCT AAATAGGATT CTCATGGAGC TATTGTAGAT 000960
000961 AACTGTACAG AATCACTTTT GTGTAATTGA ATGAAGCAGT TTCCTCTGCA TGATTGCATA GTGAAAGCCT TTTATATATC 001040
001041 TATATTTTTC AATACTTAGA TTTTACACTA TTAAGCTGCT CTAGTCATGC TATATTTGTT TTTTTAATAG AGTTTATAAA 001120
001121 TATTTATGCT CAAAATACAG ATCAACTGAA TATTTTTGGT CTTGTTTACA AGATAAATCA TACTTTAAAA TGATACAGGC 001200
001201 CCCTCAAGTG TCTTAGGAAA AAGTCATTGG TGCTATAAAA CCTTTCAGTA TCATTTTTGA ACCCATTGTT CAGACTTTGC 001280
001281 TAGGTTTTAA TCTGATTCCT TGTGATTTAT TATAATGTAG CAGCATACTT ATAAAAGTGG TCTGTGCTGA GTCAGAGAGC 001360
001361 CCAGCCCATT AGAAACACAT CATAATTTAA GAATATGATG CAGAATGCCC TTACACTTAT TTGTGCCCAG CTTCCCAAAA 001440
001441 AGAAAATTGT TTTGTTAAGA GGAAGGCAGT TAATTTGGCT AGAATCCAAA AACTCATTCA GCATGGCTGT TTTCCCTTAT 001520
001521 TTCAAATGAA AACTTTTCTA ATACTAAAAT ATGTAATCCT GCTTTGCTTT AAATTTCCAT GTCTGTCACT CAACAGGAGG 001600
001601 CATAGTGATT CTTAAATATT TACGGAACAT TTGGTGAGTT GTAAAGAGAA GTATTATTGC ATTGTAGGTT TTTGCATTGA 001680
001681 TGTGTCAATT TTTTTGTTTT GTCCCAAGAT TTCCTTCCAG CACCTTAATG AATGTTCATA TGATAGAATG TTTTAAGTAT 001760
001761 CAGCAAAGCA TTCATGGATG CCTGCTTTTC ATTCTCAGAA GGCTAAACCT GTTTTGGGTA TGATGCTACT TCAGAACATA 001840
001841 TTGTCTGGCA CAAGATTTCT TCTAATAAGT GGTTTATTTA AACTCAATTT CGGTGGACTG TTGAATTGAA AAACACCAAA 001920
001921 GGAGTCTTCT TGTCTGGAGA CTGGATTGTT CCAGCTTTAA ATACCTGTGC CCATAAGTAT CCCATTTCAT GAATGTGTGT 002000
002001 TGGCATGGGG AAAAAATTTC CCTGCTCTTT GAGTGGAGCG AAAGCAATTG GTTAAGCTGT AGCAGCTTTT TTGTTTATTT 002080
002081 TTTTAAAGTA ATAATAAAAC TTGAACTGAA AAAAGAAAAA AAAAAAAAAA A
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Predicted Small Protein

Name NONHSAT034472_smProtein_1679:1822
Length 48
Molecular weight 5745.9183
Aromaticity 0.191489361702
Instability index 73.4063829787
Isoelectric point 8.93572998047
Runs 7
Runs residual 0.0173404255319
Runs probability 0.0438716026952
Amino acid sequence MCQFFCFVPRFPSSTLMNVHMIECFKYQQSIHGCLLFILRRLNLFWV
Secondary structure LLEEEEELLLLLLLHHHLHHHHHHHHHHHHHHHHHHHHHHHHHLLLL
PRMN -
PiMo -