NONHSAT035023
Revision as of 21:29, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT035023 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1017 nt |
Genomic location |
chr13+:103541208..103542184 |
Exon number |
1 |
Exons |
103541208..103542184 |
Genome context |
|
Sequence |
000001 AAGAATTCGG CACGAGGTAT TTTTTTCCGT GTCATAAAGA AATTTCATTT TAATCCTCAT TCCTCTAAAA GAATTTTTAT 000080
000081 GGTTTTATCA GCATGATACT TACAAAGAGC ATATCCCCCT TTAGACAAAT TATTTTAGGC AGCCAAGTTT AGTTTATTTG 000160 000161 GGTTTCATGC TATAAATTAT GCTAATTTAT GAAGGTTATT TCTTGTTGGA TGCTTGTAGT ATTCATATAA TATTTAAATG 000240 000241 CAAAAGAGAA TATTAATATA AAGCATTATC AATTAAATTT TATTCAACCT GATAATGTTT TCTGTGATAC ATGATCATCG 000320 000321 TAGGTGTATA ACTAATTTTG CATTACCATT TATGAGTGAT ATAGTTGTGT TCTTTTTAAA GTGTGTATGC AATTAGTAGT 000400 000401 GGTTATATTC ATTTCGTGAA ATCTCTTTGA AGGTCCTTTG TTTTAGGAGT GTAAGTAATT TTCATTATAA TATATTCATA 000480 000481 AATTTTTAAA TCTCATTTCC ATATGAAGGT AAAGATGGGG TCATTCTTAG AATGAAATAA CTCTATTCAG AAGGACGCAG 000560 000561 TCAAAAGCTA GGAATTCATT TGTTATCCCT CTGTAGTTGT TAGGACAGGA GCACTAATCT GGCCAACTAA CCTTTAAAAG 000640 000641 AACATGCAAA GTCAAAGATG TCAGGTTGTA CCAGTAAATA TTCACCGGCA AACTTTTTAT ATCAAAGACT GGAACTTTCG 000720 000721 AAGATGCTCC TGGGACTTAG TGTACTCTAA CATCTATTAA TCCCTGGTAC CTTAGGTGAC TTGTCATAGA AGTGCTACAT 000800 000801 TTACAAGTAG TATGCAAGGA GGCCCAAGAG GACAAATTCA GTTAAAGGTC AAGGAAGCAA TTAACGTTCT CTACTTTTCC 000880 000881 CTAAAGAACT TCCACAGCAA ATGTTGCCCT CCCCCTGCAT CCCCAATCTT ACCAAGGCAA GTGCATATAG TGAAATGGAA 000960 000961 GTTAAAGTTC AAATAAAACA TGTTTCCAAT ATTAAAAAAA AAAAAAAAAA AAAAAAA |
Predicted Small Protein
Name | NONHSAT035023_smProtein_92:151 |
Length | 20 |
Molecular weight | 2131.5804 |
Aromaticity | 0.0526315789474 |
Instability index | 79.3157894737 |
Isoelectric point | 11.0003051758 |
Runs | 5 |
Runs residual | 0.0123839009288 |
Runs probability | 0.0213743154919 |
Amino acid sequence | MILTKSISPFRQIILGSQV |
Secondary structure | LEEEELLLLHHHHHHLLLL |
PRMN | - |
PiMo | - |