NONHSAT035207

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT035207

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

2456 nt

Genomic location

chr13-:111794731..111801055

Exon number

3

Exons

111794731..111796923,111797032..111797138,111800900..111801055

Genome context

Sequence
000001 tagcctggaa gttttccatc ttgcagcagt gcacctcagg aagatgacag gtgcaaagtc tgcctttctg tatgaattgg 000080
000081 gagaatggcc atcatgagag aggagatggg acggcccaac cagcttcatg tcttccatgg cttggcacct tctaagGCCA 000160
000161 ACGTGACTCC CCCGTCACAA AACAGTCCTC AAGACAGATG GGCTGCCAGC GTGCTGGGGT CTTCATAGGG CAGATCTCCA 000240
000241 CCATGTCATG CAGAGATGCA GTGCTGTCTT CTGATCAGGA ATTATGCTCT TCCACGGCAC TCTGGCTCAT TCCACAGTCA 000320
000321 ATAATGTTAA ATGGAGTGAA AATGTAGGTC AGTGGAGCTA ACTTGGAAGT CTCCAGGACA ACTCTTCCTC CAAATCCATT 000400
000401 GGAAAACATG AAGCAACAGG CAGAAATGCC AAGGATTTGA CTGCTAAATA CCAGATAAGT AAGCTGCTCC CCCAAAAAGT 000480
000481 CTTCAGCATA CTAAGCAAGT CGTTTACTGG AAGAAATTTA AACCTTTTTT AAAGCATGTT TCTCTTTTGC ATTCCTTCTT 000560
000561 CAAGAAATCC CAAAGCCCAA CTCTAAATGA AATGCTGCAG CCATCTGGGA ACAAACAAAT TGTTTTCCAT GAGTATGGAA 000640
000641 CTGGCCAGAT TATGAAGGGT AGTAATAGAT ACAAGTGTAC CAAACCTCCA GTTCCCAACC TAAATTCAGA TATGCCAGAG 000720
000721 ACATGAAATG TCAAAGAGAG ACCAACAAGA CTACAGTGCT TCAACTGACT CATGCATCCC CTGAGGCTTG GTTCTCACAA 000800
000801 ACTCTAAAAG CAGTTTAAAA TCCCTCAGAG TTGGTGGCAA CAGTCCCAAA TTCATAGCAA TGCCAAAAAT GGATAACAAA 000880
000881 ATATTTAAAG ATAAAACTTC ATCAGATAAC CCAGAATACA TTTCACCATT GAGTCGTATT TTGTTCTCCC AGTATTGTTA 000960
000961 GATGAAAACG TAGCAGTTGT ATCTTAATTG TTGAATGAGA GTGAGCTGGG AAACAGCACT TGCCCTGCCA CCCCTCAAGG 001040
001041 TTAGGCTGCA GCGATGCAGA TCCCCAGGAA GCAAGTGCAG CTGGGGTGGG CACCGTTGAG GTCTCGCCAC TTCCATCGGC 001120
001121 AGCCACCATT CCATGTGCCC TTGAAGAATC TGGGTACAAG AAAACTGAGA GCAGTACAGA TTCATAAGAC AACTCAAGTT 001200
001201 GAGTCTGGTG GTCGAAGATT GTTCTTTCAC CTGTTCACGT GGAATAATTG TCTTTTTTCT TTCACCTTCA TGCTTGTGAC 001280
001281 CTAATGGAAA CAGACTGTAA ATGATGGCAT GGCATTCTGT GAATCAGAGC TGCCCATCAC TTTCTTGTTA AGCTCCCTTG 001360
001361 CTCTATTGTT TCCCACCCTT TGGCATGTTC CCTCTCCCAC TGAGTGCACT TCAGCATGGC TGGTGATTAT TTTCTTATTG 001440
001441 CCCATTGTTA AAGACACCTA TGGAGAAGGC TGTGGCCTCT GACGGAAATG TGCTAGTGAA TCCAAGGTGG GTACTAGCTG 001520
001521 TGTAGTCATT GTCTGGGTGA GTTTCAAAAT GAGGCAGGGT CATGTCCACC CTCAGCACAA GCAGTCTGTT CTCTGCCGGG 001600
001601 ATGCTGCCTC CTGTATCTAC TCTGCCTCAC CAATAACCCA ATGTCCTATT CTTGACCAAG GCACCTTGGT GAGAATGGCA 001680
001681 GCTCCTGTCC CTGCAGTCCC GAGTGCTACT CCGCTGTTCA TACTTGTGTT CTCAGACGTC TAGGGTTTTT TATGGCGGCC 001760
001761 CTGCCTTTGT TTGCCTCCAC CACTCAGATT TGCTTCTGAA GTGTCCTACT GCCACCCAGC TCCACACACA GTGAAGTCAG 001840
001841 GGGGCAAGAG TGGGAGCTCC GCAGTCATGC AGTGTTTTGT TCCTGGCCTT TCCCACTCAA GAGTCTTTGC TTCAAAGCTG 001920
001921 TGTTTAATGC AAGTTCAAGT CTCAGAGCCA CCTAAGAGAA GACTGAACCC GGCCACCTAG GAAGAAACTG TTTTCATCCA 002000
002001 CATGTTAACT TGTGGGGGAT TTGAAGGCAT GCAAAGAGGC AGGCTCATTT TGGAGAGGAG ATGGTGAAGC AGGAGGGAGC 002080
002081 CATTCACCCA GAGGAAGAAA GTGAAATAAG GGGACTGGAA ACAGCTGAGG ACATCCACAG TTAAGCACAT CTCTCTATAA 002160
002161 ATAGCAGTTG GGGCTGCCCT AGAGAGAGAG GTGAGAGGAT AGGAAGAGAG GGCAGGAAGC ATTGGCCAAG GACACTTGTG 002240
002241 GGCTATAAAA GCCTCTTGCA TGAAAGATGG GCCAGTTGGG ACTTTCATAT TATCTGTGAG TAATAAAAAG GTTGACAAAA 002320
002321 AGATCATTAT TACCCAAAAC TCAAGTATCA GCAGGGTGGG CTGAAATCAA TAGGGCCATA GTTGTGAATA AGATGTGTAG 002400
002401 CAATCTGTAC TTGGGAAATG CATTTTTTAA AAACCACTTA TAAACTGATC TTCCAT
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Predicted Small Protein

Name NONHSAT035207_smProtein_197:346
Length 50
Molecular weight 5278.178
Aromaticity 0.0408163265306
Instability index 58.3285714286
Isoelectric point 5.86968994141
Runs 9
Runs residual 0.0216216216216
Runs probability 0.0354570256532
Amino acid sequence MGCQRAGVFIGQISTMSCRDAVLSSDQELCSSTALWLIPQSIMLNGVKM
Secondary structure LLLEELEEEEEEEELLLHHHHLLLLLHHHHHHHHHHHHHHHHHHLLLLL
PRMN -
PiMo -