NONHSAT035915

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT035915

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

3243 nt

Genomic location

chr14+:24030306..24037282

Exon number

4

Exons

24030306..24031082,24033936..24034049,24034665..24036631,24036898..24037282

Genome context

Sequence
000001 AGGCCAGGGA AAGAAGTCTG GAACAAAGGG AAGACAGATG ACCATGATTG ACTTCATTCT TTTACCTCCT GAGATGGCGA 000080
000081 TGGGATGGGG GACACACAGG AAGAAGCAGG GTCCATGAGC CTCAGCCCTT GGCTTAGGAG GAGGAGCAGT ACATTTCCAC 000160
000161 CTACCTTCTC TAAGACATCT TCCCTTTGCT TAGGCTTACC TGGGGGTGGA GGTACACAGG GAAGGTCAAG CAGGTGTACC 000240
000241 AGGGCACCTC CTGGGGAGGG GTCCAGATGG GGAGGATGCT GGACATCCCC AGAAGCCCCA TCCAGGAGAT CTAGCAGATC 000320
000321 CAGGAGCTGT GAGGCCTGGC AGAAGGGACA GAAGGGGCAG GGCTGGGTAT GAAGCTCAGC CCGTCTTCCT ACCCCAGAGT 000400
000401 TTCTAGCCTT CTCACCTGGG GCTCTGTGGG CACTGGGGCT GCTTCTGAAA GCTGGGCTGC TTCTTTGCTT TCCTTTGCTT 000480
000481 CCTCATCAGC CTGAGGGCCA TCTCGCTCCA CAAGAGGCAT TTTTTCCAGG ATGGCAGCCC TGAGAGGATG GAATGCAAGT 000560
000561 GTGCCTCTGT GTGGTCTCTG GGCCTTTCAC AAGAGGCATC TAGGATGAGG ACTAGGAATA TGGAGCCCTG GGCACATGGT 000640
000641 GGCTCAGAAG TACCCTTCTG ATTTCCTAAA ATGACATGTT GTTGCTGATT TTCAGATGAA CAAGGAGGGT TGGAAGCCAG 000720
000721 CTTAGCTTCA ATTAACAGTG GGTGGGAAGC TCTCACCGTG GATATGGAAG AACACAGGGT CTCACTCTGT CGCCCAAAGC 000800
000801 TCACTGCAGC CTTGACCTCC CAGGCTCTGA TGATCCTCCT GCCTCAGCCT CCTGAGTGGC TGGGACTACA GGCACATGCC 000880
000881 AACAAGCCCA GGTCCTGGGA TGACCCGAGC AATCCTGTGC CTGCTACTCT GCTGCCCAGG ACACTGAGAG AACCAGTGTT 000960
000961 CTCTGGGAGG AAACCACTGG TCATGGTCTT ACTGCTATGC CCTCTCTGAT CCAGGGATAC AGCAGTGAAA GGTCACCCCA 001040
001041 CCTGCAGGAA GGGGTCGCTG ACTCCAGATA TGCTGTGTTC TGTGGAGTAT CCCATTGTCA CCAGAGTCCG GAGGATGTGT 001120
001121 ACCAGCTGGG GTACCACCTG GAGGGAGGGC ACAACTTTGG GCATTCGTTC TAATCCTCTC CAGCTAAAGC CCCATTCCTT 001200
001201 CCCCACTGAC CCTGTCTTCC AGGCCCAGGG CCTGCCCCTT CACCAGCCCA CCTTTCGGAA GTGCCTGAGG GCTGCAGGGC 001280
001281 TTCGTTCGCA GAGCTCCGTG ATCAGCGTGA TGGTGCCCAG CAGGATGCCT GGGGTCAGCG TCGGGGAAGT GAATGGTGGG 001360
001361 GGCCAGGGGC AAGAGAGTCT ATTGCGTGTG TGCCTGTGTG TGTGCACTAC CCTTCTCCTG TGAGCTGGGG TTCCCATCCG 001440
001441 ATTTTCAATT CTTCTGTCCA TAGACCTGAA GCAAAGGATG GGGGGCCCCA CAGCCTTACC ATGGTGACGC TCATGAAGCA 001520
001521 GTTGGGCACA GGGTGGGAGG AAGACACTGG AGAGTTCAGG GACCTTCCGG ATCATGTGCA CTGCAGTCAG AATAGCCTGC 001600
001601 AGAGGTCAGG GGCCTCAGAC AGGGGTCAGA GGAGATGGAC CCCTGCATCT ACTACTATAT AGCACGCAGC AGGCAGTGTG 001680
001681 CAGGAGCACG TGCCAGGAGT CCCGCCATCT CACCTTCTTG CGCACGTAGG GACTGGGCTG CAGGAGCAGT TTCTCCACCT 001760
001761 CTGGGGCCAG GTCTCGGCAC ATCTCAGCAG AGCCCATGGT GCTCAAAGTG CACAAGGCCA GGCCTTGTAC TGGCTGAATC 001840
001841 CCCTGGCTCA GGTCACTGCA GGGTTTGGGA GGACGGTCAG TCAAACCTCT GAGAAAATCA GTCCTTTTCA ATACCCACAA 001920
001921 CAGGCAGTCC CCTGGGATTT CCAAGGTCCC TACTCTCCCA TCTCCCTGAT TCCAAGTGAT TGCCAGAACC CTCTCACTTC 002000
002001 TTGATGCTGT TGGTAATGAG CAGGTGGGCA TCGTGCCTCT CATCCAATAG AAGCATGGCC CCCAGGTAGC CCACCCTCTT 002080
002081 GTCTGTGAAT CTGGAGGAGG CGATCAGTTT CAGGCACTCC ATCTATAGTG AAGGGGGCAG ACCAGGAAGA GGCAGGGGTG 002160
002161 AAACCATAGA CACTCACATC CCTGTTCCAT CTTCCTCTTT AAAACCAGAT TAACCTGTGG GGCATCATAT CTCATCACTC 002240
002241 TCCCTTTAAC AAGAGGAGAA GCTTAGGAAA TTCAGGCGTT AGTGGGTAGG AGGAACTAGG AGTTGAGGAG GATGGGAGCG 002320
002321 GAGAGGAGGA GATGCCTGCC CTAAAGGAGG CTGGCCAGAG AATGAAGGGT TCAGGCCAGC TGATGACCAG TAGGGGTAGC 002400
002401 AATGGGGAAA GAGGTTTGCA GTGCAGGCTG TGAAGACTCT GAAATTGTAG AATTTAAAAA ACCAGGGCAT AAACAGGTGA 002480
002481 GAGAGTCTGG GACTCTGCCC CACTAGCCTT CATCAAGCTC AGGAGGGAGG TATTCCTGGC CAGTACCTGT CCAAAGTGGG 002560
002561 CGGGGTAGCC CAACATGTGG ACGTAGAGCA GTTTGGCCAG CTGCCGGTGC CTGTGCACTG GGTCCCCGTC GCGGAAGGAG 002640
002641 GCCCGGATGT GGGCACACTC CTTTTGGATC ACCTCCCGCT CCTGGGCCTG AGTCTTGGCC CCGCGAATCT CTTCGATGAG 002720
002721 GTCCTGAAGC TTCAGCGAAG GCACCACCAT CCTGACTGGC AGAGTCCGGG AGTGGAGAAA CACTCTCTGG TCGGGCGTGC 002800
002801 CTGGGCTTTC GGCCCAGGCC CGTCCTGTGT CAAGACCCTA AGAGCCCGGG TCCCACAGGC AGCGGCAGCG GCAGCGACAG 002880
002881 CCTGCCTACC CCAGGACTCC AGCCTCACCT GGCTTCTGCC TCAACTCCGC TCCTCTGCCC CCCAGCGCTT CCTGGTACGG 002960
002961 GGCCGAGCAG GGGTTGGTGC TCCGTGCGGT CCTTCCCTCT CCCCGCCTCC ACCACGGGAC CCCGCCCTCC TGGGCCGACT 003040
003041 GCAGAGCCTT CCTGAATCCT CTGACCTCGG GCCTCAGGCT TTAGCGGAGA GACAGCATGA TAGGCCTGGA GTTCTTCAAG 003120
003121 AGGCCTCCTC GCACATCCTT ACCACCCGGA GAGCCTCAGT TTGGATTTGA AGCCATCGCA CCCCAAAGGA GATGACAATC 003200
003201 CCCCCCCTTT TTTGAACTTT TTTATTAATA TATTTTTTTT GTT
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Predicted Small Protein

Name NONHSAT035915_smProtein_1634:1891
Length 86
Molecular weight 9022.1142
Aromaticity 0.0705882352941
Instability index 89.5011764706
Isoelectric point 8.91387939453
Runs 11
Runs residual 0.00713012477718
Runs probability 0.0479516950106
Amino acid sequence MDPCIYYYIARSRQCAGARARSPAISPSCARRDWAAGAVSPPLGPGLGTSQQSPWCSKCT
RPGLVLAESPGSGHCRVWEDGQSNL
Secondary structure LLLEEEEEEELLHHHLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLL
LLLEEEEELLLLLEEEEEELLLLLL
PRMN -
PiMo -