NONHSAT035920
Revision as of 21:33, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035920 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
673 nt |
Genomic location |
chr14-:24033244..24034027 |
Exon number |
2 |
Exons |
24033244..24033430,24033542..24034027 |
Genome context |
|
Sequence |
000001 gtagtcccag ccactcagga ggctgaggca ggaggatcat cagagcctgg gaggtcaagg ctgcagtgag ctttgggcga 000080
000081 cagagtgaga ccctgtatca aaaaaaggag aCCTGAGGAG GGCCTTGAGC AGATACATCT CCTCTCTCAT CCACTCAGGT 000160 000161 GGCCACTAAC ACGGACACCA GCCGAAATGC CGGAAATGCG GTCCTGTTTG AGACAGTACT CACCATCATG GATATCCGCT 000240 000241 CTGCAGCTGG CCTACGGGTA TCACCCCTTA TGCCTCTCCC ACTACGGCCC CGCCCACCAC CTCACCCACA CAGGTCCTGC 000320 000321 TTGCTGGTTT CTCCCTCCTA GCCCCATCAT CTTGCGCCAA TGTGTTCCCA GTCCTCAATG GCTGAGCAGG TTGCTCCTTT 000400 000401 CCGACTGACC CCAACTTCTG CCTCTCATAG GTTCTAGCTG TCAACATTCT TGGTCGCTTC CTACTCAACA GTGACAGGAA 000480 000481 CATTAGGACA GGACGGGGAG TGGGGGCTGA TGGCCATGGT ATGATAGAAC CTCCCCCATC CTGACCAGGT ATGTAGCCCT 000560 000561 GACATCACTG CTTCGACTGG TGCAGTCTGA TCACAGTGCT GTGCAGCGGC ATCGGCCCAC TGTGGTGGAA TGTCTACGGG 000640 000641 AAACTGATGC CTCCCTCAGC CGGTGAGCAG TGA |
Predicted Small Protein
Name | NONHSAT035920_smProtein_227:340 |
Length | 38 |
Molecular weight | 4052.8403 |
Aromaticity | 0.0 |
Instability index | 121.951351351 |
Isoelectric point | 11.8244018555 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.00346228581522 |
Amino acid sequence | MDIRSAAGLRVSPLMPLPLRPRPPPHPHRSCLLVSPS |
Secondary structure | LLLHHHLLLLLLLLLLLLLLLLLLLLLLLLEEEELLL |
PRMN | - |
PiMo | - |