NONHSAT036232
Revision as of 21:35, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT036232 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1003 nt |
Genomic location |
chr14+:31028364..31077125 |
Exon number |
9 |
Exons |
31028364..31028478,31055924..31056021,31058589..31058690,31061529..31061653,31062680..31062845,31066626..31066732,31070976..31071100,31071205..31071337,31077094..31077125 |
Genome context |
|
Sequence |
000001 GAATTTGAAT CCTGTGGGCC GTTGAATGTG GCTGCTCGCG GTCGGCGTGC CCCGACGTAC AGCGGGCCGG GAAAAGTGGC 000080
000081 ACTGAGGCTC TGGAACTTCT GCCCAGCTCT CCTTGCTTGT GTTTTCTGTC GAAAACATGA TGACTGTCCT AATAAATACG 000160 000161 GAGAAAAGAA AACTAAGGAG AAATGGAATC TCACTGTACA TTACTACTGT TTGTTGATGT CAAGTGGAAT TTGGCAGAGA 000240 000241 GGCAAAGAAG AAGAAGGAGT TTATGGTTTT CTAATAGAAG ATATCAGGAA GGAAGTGAAT AGAGCTTCTA AACTGAAATG 000320 000321 CTGTGTTTGC AAGAAAAATG GTGCTTCAAT TGGATGTGTT GCACCCCGAT GTAAACGAAG TTATCATTTC CCATGTGGAC 000400 000401 TTCAGAGAGA ATGTATTTTC CAGTTTACTG GCAATTTTGC GTCATTTTGT TGGGACCATC GACCTGTTCA AATAATTACA 000480 000481 TCTAATAATT ATAGAGAGTC CTTACCATGC ACCATTTGCT TGGAATTTAT TGAGCCTATT CCAAGTTATA ACATATTACG 000560 000561 AAGTCCTTGT TGTAAGAACG CTTGGTTTCA TAGAGACTGT TTACAGGTTC AAGCAATAAA TGCGGGAGTG TTTTTCTTTA 000640 000641 GGTGTACAAT ATGCAATAAT AGTGACATCT TTCAGAAAGA GATGTTGAGA ATGGGAATTC ATATTCCTGA AAACAAATGG 000720 000721 GAAATAAAGC GCTGTCAGTG TTGTGGTTCC AGTGGCACAC ATTTAGCCTG CTCCTCATTA CGGTCATGGG AGCAAAATTG 000800 000801 GGAGTGTTTG GAATGTAGGG GTATTATCTA CAATTCAGGA GAGTTCCAAA AAGCCAAAAA ACATGTATTA CCCAATTCTA 000880 000881 ATAATGTGGG GATTACAGAT TGTTTGTTGG AAGAGTCATC ACCTAAATTA CCCAGACAGT CACCTGGATC CCAGAGTAAA 000960 000961 GATCTACTGA GCTCTGAAAG AGAATCTTTA CTATGAAGCT GGC |
Predicted Small Protein
Name | NONHSAT036232_smProtein_182:301 |
Length | 40 |
Molecular weight | 4898.5056 |
Aromaticity | 0.128205128205 |
Instability index | 110.582051282 |
Isoelectric point | 10.0150756836 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0299795593914 |
Amino acid sequence | MESHCTLLLFVDVKWNLAERQRRRRSLWFSNRRYQEGSE |
Secondary structure | LLLLEEEEEEEELHHHHHHHHHHHHHHHHHLHHHLLLLL |
PRMN | - |
PiMo | - |