NONHSAT036276
Revision as of 21:35, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036276 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
727 nt |
Genomic location |
chr14-:31721229..31733032 |
Exon number |
2 |
Exons |
31721229..31721429,31732507..31733032 |
Genome context |
|
Sequence |
000001 GGCTGTATGC AAAGAAGCTG GAGGCATCCT GCCTCCTGAC CTGTGACTCA CATGGGATGC TGCAGGACCT CATTCCTAAC 000080
000081 ATCTCACAGG AAGAGATCAG CTGAGAATGG TACATTCAGG CAGGAGACAT TCTTGGGTTT TCCAGTGTAA AAGACATTTA 000160 000161 AAAACAATTG ACTAATGAGA GGAATGTGTA GCAAATGTTG AAGCTGCCAG TATTCTTGCA AGTGAGCCAA TGACCTTTTA 000240 000241 AGCTACATCT ACAACTGACT AGTTTCTTGG CCATCATCCC AATGAAGGCT CCTTTCCCAG TTTAGACTGT ATTGAGATCT 000320 000321 GGCTTGGCAG TAAGACTTTT AGCATCCTCA GATACAGATT TATTTCAGCA TGAAATCACA TTAAATCAGC TTTCTAATAA 000400 000401 AGGCCTCAAA AAACAAAAAA CATTGCTGGG TGTGGTGGCT CATGCCTGTA ATCCCGACAT TTTGGGAGGC CGAGGCAGGT 000480 000481 AGATCACCTG AGGTCAGGAG TTCCAGACCA ACCTAAAACC CCACCTGACT ATGAAATTTA GAATTTTTTT TCTTTCCCAA 000560 000561 AGAACAACTT TCTCACCACT CTTGTTATAC ATACTATTCC AAAAATAAGT GTAACAAGAA ACAGACAAAT ACAGGACAGT 000640 000641 TCAGGAAACC AGTGAGTTTG AAAAATATAT ATATATTTTC CCTCTAAAGA ATGTGTGTGG CCAGGAGTGG TGGCTCATGC 000720 000721 CTGTAAT |
Predicted Small Protein
Name | NONHSAT036276_smProtein_530:607 |
Length | 26 |
Molecular weight | 3138.8087 |
Aromaticity | 0.24 |
Instability index | 47.52 |
Isoelectric point | 11.0969848633 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0368839427663 |
Amino acid sequence | MKFRIFFLSQRTTFSPLLLYILFQK |
Secondary structure | LEEEEEELLLLLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |