NONHSAT036417
Revision as of 21:35, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036417 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
506 nt |
Genomic location |
chr14+:36631178..36684697 |
Exon number |
5 |
Exons |
36631178..36631218,36633326..36633472,36634951..36635050,36684165..36684264,36684580..36684697 |
Genome context |
|
Sequence |
000001 ccaagttcga acttgctggc agctttgttt acaccgtgag gTGTTCGCTT CCTGGATGTT CTGACTAATT TAAACTATGG 000080
000081 TTAATTGAAG ACTGAAATAT TCGGGAAACT ATGACAGGAA CAATTTGCTA CGGACAGTTT CCACCTGTAC TCTCAAGACT 000160 000161 TAGAAGCCAT ATGGATAGAA TGAAATAGGA ATTGGTGGTG TCTTGGAATA TCTGCTTCAG GACGATAATG AAACTAATGA 000240 000241 TTTAGGGCAG TAGAAGAAGC CGTGGGAGGA ACTTTCACAT TTGGCGAGCA TGGAATCCCC TCTGCAGTTA TGTTTGCCTG 000320 000321 TGCATCTCCG GCAGCTGGAG GACGAATCAC ATCAGGCTGA TGAGTGTGTC ACGCTCTTCA TCCCCCAAGA GCTGTGATGA 000400 000401 AGACCAAGAC AAACAGTAGA TTAACAGTGC TACCTTTTAT AAGGCTGATT AGTTCCTAAA ATATGCTGAA AGGAAACAAA 000480 000481 ACCAAAAAGA AAAAAGAGTG GAAAGG |
Predicted Small Protein
Name | NONHSAT036417_smProtein_110:187 |
Length | 26 |
Molecular weight | 2925.4777 |
Aromaticity | 0.08 |
Instability index | 48.324 |
Isoelectric point | 10.0442504883 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0265147500442 |
Amino acid sequence | MTGTICYGQFPPVLSRLRSHMDRMK |
Secondary structure | LLEEEELLLLLLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |