NONHSAT036593
Revision as of 21:36, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036593 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
735 nt |
Genomic location |
chr14-:43276581..43277315 |
Exon number |
1 |
Exons |
43276581..43277315 |
Genome context |
|
Sequence |
000001 CTGATTCAGA AGGCTAAGCT GACCAAGCAG GCTGAGAGCG CTTCAACATG GCCACATTCA GGAAAGCCGT GGCCAAGCAG 000080
000081 GGTGTCCAGT TGCCCAAAGA GGAGTACAAT CTGCTCTCAG TGGCCTACAA GACCATGGTC AGGGGCCACA GGTCTGCCTG 000160 000161 GAAGGTCATC TGAATGAAGC ATTGAGCAGA AAACCAATAC CTCCAACAGA AATTTGCAGC TGATGAAGGA CTATCTCAAG 000240 000241 CAGAAAACTG ACAACTCTGA CAAGAAGTTG CAGCTGATAA AGGACTAAGC AGAAAGTGAA GTCTGAGCTG AGATCCATCT 000320 000321 GCACCAGGGT CTTGGAATTT TTGGATAAGC ATTTACTAGC CAATGCAACT AATCCAAAGA GTAAAGTTTT CTTTCTGAAA 000400 000401 CTGAAGAGAG ACTACTTCTT GTACTTTACT AAAGTTGCAT ATGGCAATGA TTGGAAACAA ATAAAAGATA ATTCCCAAGG 000480 000481 AGCTTACTAA AAAGCATTTG ATAGAAGCAA GAAAAAGACG CAACCCACAC ACCCAATCTC CCATGATCTG GCTCTCAGCT 000560 000561 TTTCCATATT TTACCATGAG ATCCTTAATA AAAAGGCTTT TAATGAGGCC ACTGCAAAAC TTGATAAACT TAATGAACAC 000640 000641 TTATGCAAAG ACAGCACCCA CCTTAGAAGT TGATTAGAAA CAACCTAACA CTATGGACAT CAGACAATGC AGGAGAAAAA 000720 000721 TGTGACGGAG CAGAA |
Predicted Small Protein
Name | NONHSAT036593_smProtein_542:676 |
Length | 45 |
Molecular weight | 5216.2574 |
Aromaticity | 0.113636363636 |
Instability index | 45.1931818182 |
Isoelectric point | 9.98785400391 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.0361420243774 |
Amino acid sequence | MIWLSAFPYFTMRSLIKRLLMRPLQNLINLMNTYAKTAPTLEVD |
Secondary structure | LEELLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |