NONHSAT037076
Revision as of 21:38, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT037076 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1620 nt |
Genomic location |
chr14+:57507603..57509222 |
Exon number |
1 |
Exons |
57507603..57509222 |
Genome context |
|
Sequence |
000001 ATGATGTTTG GTGGCTATGA GACTATAGAA GCATATGAAG ATGATCTTTA TAGGGACGAG TTATCTAGTG AACTGAGTGT 000080
000081 TGATAGTGAG GTGGAATTTC AACTCTATAG CCGAATTTAT TATGCCCAAG ATCTTGATGA TGTCATCAGG GAGGAAGAAC 000160 000161 ATGAAAAAAA GAACTCTGGG AATTTGGAAT CTTCGAGTAG TAAACCAAAT CAGAAGAAGC TAATTGTCCT TTCAGATAGT 000240 000241 GAGGTCATCC AGCTGTCAGA TGGGTCAGAG GTCATCACTG TCTGATGAAG ATAGTATTTA TAGATGTAAA GGAAAGAATG 000320 000321 TTAGAGCTCA AGCACAAGAA AATACCCATG GTCCTTCTGC TTTTCTTCAA TCTAATGAGC TGTTTGATAA GAAATGCAAG 000400 000401 AGTGATATTG AAGAGAGATC AGGTGTAATC CAAGAGGCCA TGATTATAGA GGTCAGTTCA AGTGCAGAGG AAGAGAGCAC 000480 000481 CATTTCAGAA GGCAATAATG TGGAAAGCTG GATGCTACTG GGATGTGAAA TAGATGATAA AGATAATGAT ATCCTTCTCA 000560 000561 ACCTTCTGGG ATGTGAAAAC TCTGTTACTG AAGGAGAAGA TGGTATAAAC TGGTTCATCA GTGACAAAGA CATTGAGGCC 000640 000641 CAGATAGCTA ATAACCAATA ACCTGGAAGA TGGACCCAGC GATATTATTC AGCCAATGAA AACATTATCT GTAGAAATTG 000720 000721 TGACAAACAC GGCCATTTAT CAAAAAACTG TCCCTTACCA TGAAAAGTTC GTTGCTGCTT CCTGTGCTCC TGGAGAGGAC 000800 000801 ACCTCCTGTA TTCCTGTCCA GCCCCCCTTT GCAAATACTG TCCTGTGCCT AAGATGTTGG ACCACTCATG TCTTTTCAGA 000880 000881 CATTCTTGGG ATAAACAGTG TGACCAATGT CATATGCTAG GCCACTATAC AGATGCTTGC ACAGAAATCT GGAGGCAATA 000960 000961 TCACCTCACG ACCAAACCCA GACCACCCAA AAAGCCAAAG ACCCTTCAAA ACCATCAGCC TTAGCATATT GCTGTCACTG 001040 001041 CATGCAAAAG GCCATTATGG ACACAAGTGT CCAGAAAGAG AAGTGTATGA CCTGTCTCCA GTATCTCCAT TCATCTGCTA 001120 001121 CTATGATGAC AAATATGAAG TTAAGGAGAG AAAAAAGAGA GTAAAATAAA AAATAAAAGT ACTCAAGAAG AGTGGGGATA 001200 001201 TCCCAGAGCC ATCCAAGCTA CCTTACATAA AAGCAGCAAA TGAGAACCCC CATCATGATA TAAAGAAGGG CTGTGCCTCA 001280 001281 TTAAAAAGCA ACAGGTGGCC TCAAGAAAAT AAAGAAACAC AAAAAGAAAT GAAGAATAAG AATAGAAAAC TGGGAGAAGC 001360 001361 ACAGGAAGGC TGACAGACAT CGTGAAGTGG ATGAGGATTT TCCCTGGGGC CCCAAAACCT ACTCTTCTCC TGGCAGTTTT 001440 001441 AAAACCCAGA AGCCTTCCAA GCTCCAAGCC CTTTCATCAT TCATCGCATT GCCATATATC GAGAGAAGAC AAGTCTCCCA 001520 001521 AGGAGGGTAA GAAGGGCAAG AGAAGAAAAA GGAGAGATGC TTGGAAGATG ATGACAATGA TAACTTATTT CTTATTAAGG 001600 001601 AGAGGAAAAA AAAGTCTTAA |
Predicted Small Protein
Name | NONHSAT037076_smProtein_932:1168 |
Length | 79 |
Molecular weight | 9015.2822 |
Aromaticity | 0.0897435897436 |
Instability index | 62.65 |
Isoelectric point | 9.61444091797 |
Runs | 10 |
Runs residual | 0.00547217010632 |
Runs probability | 0.0381028086911 |
Amino acid sequence | MLAQKSGGNITSRPNPDHPKSQRPFKTISLSILLSLHAKGHYGHKCPEREVYDLSPVSPF ICYYDDKYEVKERKKRVK |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLEEEEHHHHHHHHLLLLLLLLLLLLEEEELLLLLLE EEEELLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |