NONHSAT037096
Revision as of 21:38, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037096 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1322 nt |
Genomic location |
chr14+:58096559..58097880 |
Exon number |
1 |
Exons |
58096559..58097880 |
Genome context |
|
Sequence |
000001 CCGGAGATGC AGACAGTTTG CTGAGACTGC TAGTGCTCTA GGCTGAGACT CACACCACCA CCATGTCCTG CTACCAGTAT 000080
000081 CGCTGAACAC ATCTCTCTTC TTCAGGAATG TGGCCGATGA CACCAGGTAT GAAGATTTAC AGTGTGAACT TGGTCATTAT 000160 000161 GGTCCTATAG TTGATGTGTA TGTTCCGCTT GATTTCTACA TTCGCTGTCC AAGAGGATTT GCTTATATTC AATTTGAGGA 000240 000241 TGTTTGTGAT GCTGAAGATG CTTACATAAT TTGGACAGAA AGTGGATTTG TGGATGGCAG ATTAAAATAC AGTTTGCCTA 000320 000321 GGGGGATCAG AAGACACTAA ATCAGATGAA AGCCAAGGAA GGGAAGAATG TGTACAGTTC TTCATGCTAT GATGATGATG 000400 000401 ACAGATACAG ACATTCTAGA AGCCAAAGTT GTAAAAGAAG GAGATCAAGA AGGCTGTCTT CTGATTACAA CTATAGAAGG 000480 000481 TCGTATAGTC CTAGAAACAG TAGACCGACT GGAAGACCAC ACATAGCAGA AGCCATTCCA AATATGATAG ATTCAAACAC 000560 000561 TGAAATTAAT CTTTTTCAAA ATCTAAATCC AATTCAAGAT CACGGTCCAA GTCCCAGCCC AAGAGAGAAA TGAAGGCTGA 000640 000641 ATCACATTCT AGGTCTGCAT CTCACACCAA AACTAGAGGC ACCTCAAAAA TAGATTCCAA AACACATTAT AAGTCTGGCT 000720 000721 CAAGATATGA AAAGGAATTA GGGAAAAAAA GAACCACCTA GATCCAAATC TCAGTCAAAA TCACAGTCTA TGTTTAGGTC 000800 000801 AAAATCGGTA TCAAGGTCTT GGACTAGTCC TATGCTCAGT GGCCATTGAC AGTATAAACC ATGATCATTT TTAGGCGTGT 000880 000881 GTCATTCACT TATTCATAGT TTGGTTTACC TAAATTATCA GGAATACAGT GTTGCAATGA TGATTAAAAA GACACTTGTT 000960 000961 AGTTTTCCCT GTACCAGGCA ATGATCATAA TCAAAATGAT ATGCTGTTGA GAAGCCACTC TTAAGAGTCC AGTTTGTTTA 001040 001041 ATGTTATGAG CAGCCACCAA TTTGTGGTGT CTCTGTATAT TTTTGTAAAG ATTCTCATTT TTATGCTTGA AGTATTTGGT 001120 001121 GAAAAGATGT GGTTGACCAT AATTTGCAAC ATTCTTTTAT TAAAAATAAA CTTTCATATT TGTATTTGGT AGAACCGTTA 001200 001201 ACCTAGAAAT GTAGCTTGTT AATAAGAATG ACACAAAAAT GAAGTCATAG CTACAGTACA ACACTGACTG CTCAGACACA 001280 001281 TTTAGGTTCA GGGCAGGCCT TTATGTCTTG TCAAGGTGTC TT |
Predicted Small Protein
Name | NONHSAT037096_smProtein_629:760 |
Length | 44 |
Molecular weight | 4882.3929 |
Aromaticity | 0.046511627907 |
Instability index | 42.5441860465 |
Isoelectric point | 10.3501586914 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.021374315492 |
Amino acid sequence | MKAESHSRSASHTKTRGTSKIDSKTHYKSGSRYEKELGKKRTT |
Secondary structure | LLLLLLLLLLLLLLLLLLEEELLLLEELLLLLLHHHHLLLLLL |
PRMN | - |
PiMo | - |