NONHSAT037152
Revision as of 21:39, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037152 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
544 nt |
Genomic location |
chr14+:59006585..59014772 |
Exon number |
2 |
Exons |
59006585..59006854,59014499..59014772 |
Genome context |
|
Sequence |
000001 TATTTCCTAT TGATAGTCAT TAAAATTCAG CTGTTTAACT TCCTTCTTTA CATTCAGGCC ACTAGATCAA ACTTCTGTTT 000080
000081 ACCTGGTTTT ATGAGAATAA CGGTGGGAGT GCATTTGGTT TGTGTTCTTT TAGTGAATAG GAATGAATCA TGATTATTTC 000160 000161 TATGCTTAAC TGATTTTCTT CTGAAAAAAT AAATTTTTAT GTAGTTTCAC CAGGTGATAT GGATCGGACA CAAATTGAGC 000240 000241 TTAATCCGTA CCTCACATGT GTATTTTCAG GTGGGAAAGC AGTGCCACTC TCCGCTTCAC AGATGCCCCC TGCCAAGATG 000320 000321 TCAGTGATGC TGCCGTCAGT GAACCTCGAG GACTGCTCTC AGTCTCTGAG TCTCAGCACA ATGCAGGAGG ACATGGAGTC 000400 000401 TTCGGGGGCA GATACCTTCT GAACGGGAAG AGACAGCCAG CACAGTGTTT ATGCCACTGG TTTTAAAGTC ATTTTACCTT 000480 000481 GGCTTAAAAC CCTCTCTCAG ACTGTTTGGT TTTTGAGCAT ATTCTGAAAA AAAAATTCCA ATAT |
Predicted Small Protein
Name | NONHSAT037152_smProtein_218:421 |
Length | 68 |
Molecular weight | 7204.148 |
Aromaticity | 0.044776119403 |
Instability index | 68.152238806 |
Isoelectric point | 4.07171630859 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0471005765124 |
Amino acid sequence | MDRTQIELNPYLTCVFSGGKAVPLSASQMPPAKMSVMLPSVNLEDCSQSLSLSTMQEDME SSGADTF |
Secondary structure | LLLEEEEELLEEEEEELLLEEEELLLLLLLLLLEEEEELLLLLLLLLLLLLLLHHHHHHH HLLLLLL |
PRMN | - |
PiMo | - |