NONHSAT037225
Revision as of 21:39, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037225 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1257 nt |
Genomic location |
chr14-:61105317..61111226 |
Exon number |
3 |
Exons |
61105317..61105739,61110182..61110643,61110855..61111226 |
Genome context |
|
Sequence |
000001 CTTATTTTTT AAAACTGTCA AATAGCTTTG AGTTCCAGGG AGAAATGGTC ACTGTACTTA ACTGTACACA CTTTTACTTA 000080
000081 TAAAGTCGTT TTTCCCCCTC AGTGATGGAC AGATGTGCAC ACAGCCACTC AGAGACCATC ATTTGGTTTG GGAGCTCAGG 000160 000161 GTCCCAATCT CCCTTGTTAG TGTTTTGGAT CATTAAGTCG GTGTTTATTT AAGTCACTAG GGTGTTTATT CTCCCTGTCT 000240 000241 TGGGCCACGG AGAAATGCCA CCCTCTGCAG GAGGGGCTCT CACAGGGAAT CTCCTCACAT TCTTCACATT CACTCCCCAA 000320 000321 AACAAACACC CTGCACAAAG ATAGCTTTCA ATGACCCTGA CAGGCTTCAA AGGAGCAAGA GCGCTGGTCC TGTAAAAGCC 000400 000401 CCCGTGATTA CTGCTTGTAA ACTTGTTAAA AGGACAATTT TCTGTCACAG TCATAAACTC TTTGTAAAAC CCCTGGCACT 000480 000481 AAATCCAGAG CGCGCATATT CCAGATGTGT TTAATAAGAA ATTGCACAAT GTGCCTCCTT CCGCCATCCT CGGCTCAGTC 000560 000561 TGGGTAAAAG GGGCGAGCAG GAGGAGGCGA GAAAGCTGGA TATTGCTTTG AGTTTTTTTG GCAATCATTT CAGAGAGATC 000640 000641 ATTAGGGGAA ACTAACCATA TTTTTTTCTT CCCTCGAGGA AATCTTCGAG AACCAGCTGT TAAGGGACCT CCAGTTTACC 000720 000721 TTCTGGGCGT CGCAGTTTAA CTGAATCTAA AGCCACTTTT CGTTTCTCCT CTACAGATGT CATAACGGTA GCCAAAAGTA 000800 000801 ATGAACAACG GCTTATAAAT AGTTTGTAGG ACGATTTGTA TTGTAATATT TAATAAGTAG CCATTAAACA GTATCTACAA 000880 000881 AAACAACGCC AGTATGCTGA ACTTTCTTAG TTCAACTAAG GCAAGAAGTA ATTTTTTTAA AAAAAACTGT TAGGATTAAG 000960 000961 TTAGAATTGA AATGAATGGG GAGATTTCAA AAGCATTTGG ATTTTCTAAC ACAGAAGCCA ACATGGATGC TCAACATGAT 001040 001041 TGACTTAGGG AAGAGGCTGG GGGAAGCAAA ACACTAATTT ACAGAAATTT CTTAGAAATT CCTGTTGGAG TAGAGATTTT 001120 001121 CTGTTTTAGT AGGATCAAGC CCAACTGCAT TGACACCCAG CCAAGAAGGA GATGTTGAAA TCTACCTGAG TTCAGGGACC 001200 001201 ACACCTGGGG CTCCATCCAG TAGTAGGACC AGGTAACATG AGAATGCCTC ATTCTCT |
Predicted Small Protein
Name | NONHSAT037225_smProtein_104:211 |
Length | 36 |
Molecular weight | 3980.5685 |
Aromaticity | 0.142857142857 |
Instability index | 44.3257142857 |
Isoelectric point | 6.69085693359 |
Runs | 9 |
Runs residual | 0.0760290556901 |
Runs probability | 0.0511884433454 |
Amino acid sequence | MDRCAHSHSETIIWFGSSGSQSPLLVFWIIKSVFI |
Secondary structure | LLEELLLLLLEEEEELLLLLLLHHHEEEHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i?????????????????????????????????? |