NONHSAT037488

From LncRNAWiki
Revision as of 21:40, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT037488

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1125 nt

Genomic location

chr14+:69070537..69075605

Exon number

2

Exons

69070537..69071064,69075009..69075605

Genome context

Sequence
000001 CGGCCGCGCT GGCCCCCTGT CCGCATGCTG TCAGGCTACC TCCGTGCCAG ACGACCAACA CCCAGCCACA GTGGAAATGA 000080
000081 CTGTTCCTTC AACTTTCTTC AGCCCCTGCC TGCTGGGGTC TCCGGAGGGA AGCGTTCACT CTAGCCCAAA TGAAACAGAG 000160
000161 CTCCAGAAAA ACCACAGTGG AGGCCACAGC GGCCTCAGGC CCTGAACTTT GTATTTCTTA GCCCGCCAGG ATTGCTGGCT 000240
000241 GCTGGGTGTC ATGTAACTCC CAAAAATGTG AAGGGAAAAC CAAAGAGCCT GAGAAGCGCA GACGTCTCCT GGCTGGGGAG 000320
000321 TCCGTCTAGA AAGTCGCCTT TCATGGTGAG GCCAGGTGCA CGCGAGAGTG GCTGGAGAAG GTGGGGTGAG CCCAGAACAG 000400
000401 GGAGGCCCGG CCCACTCCCA GGCTGAAACT CCGAGAAACT CCCCCTGCAC AAGGCCACGC CAATGAAGTC CCCTTCCTTC 000480
000481 TGGAAAGGGT CCTACACAAA TTGCTAGGGT TTCCAGTGTG ATATTTGACG AGTGGGGCGT CCAGCTGTGC TGTTGGCTTG 000560
000561 TCTCTCTAAG AGGGGAAGTG CTGAGGGCCT GTCCCCCACC ACCACCCCGA GTCCTTCCCT AGTGAGAGTT CCCTGGCTTG 000640
000641 GGAGCACGCA GGAGATGCTC GGCTTCAGAG GGGCCTTGCT TGAGCGTGGT GAGGAAGTCC CGGGGCTGTG AAAGAGGAAA 000720
000721 TGCTGGACTC TCCCTGCCTA AGGGCCTGAC CTAGAATGGG GCTTTAACCT CCCTGGAGGA GGAGAGCAGC TGCAGGTAGC 000800
000801 TGGCGGCTGC AGAGTACTCC TGGGCAGGCT GTAGGGCCAT GGGTCAGTAG CTGAAGGAGC CACCTTTCAT GCCCTCCCCT 000880
000881 CACCATCACA GTTCCCGGGC ATGAAACTCA GGCATCAGCA CCTCAGCCCA GGCCCTCAAG GAGTGGGGTT AAGTGAGCAT 000960
000961 GAACAGAGCA GGCCCCCTTT GCCTCTGGGA GCCTCCTGGC TTCCCAACAG GTGCTATCGC TGAATGAAGA GGAGGGCTGT 001040
001041 CCACAGCAGT TTCCCCAGCC AAGGCTCTGG GCTCCAGCCC TGCTGGTCCC TCTTCCTCTG TCACCCATCA GCTCTGCAGC 001120
001121 CGGCC
[back to top]

Predicted Small Protein

Name NONHSAT037488_smProtein_149:220
Length 24
Molecular weight 2395.709
Aromaticity 0.0
Instability index 63.252173913
Isoelectric point 7.95465087891
Runs 5
Runs residual 0.0103519668737
Runs probability 0.0471294824237
Amino acid sequence MKQSSRKTTVEATAASGPELCIS
Secondary structure LLLLLLLLHHHHHHLLLLLEELL
PRMN -
PiMo -