NONHSAT038123

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT038123

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

528 nt

Genomic location

chr14+:86027207..86029087

Exon number

2

Exons

86027207..86027633,86028987..86029087

Genome context

Sequence
000001 CGTGCAATTA GATCTTCTTG ACTAAGAAAA AATGCAGACA AGCAATTACT CCGTTACTTT AATTACTCTC CTAATTATAA 000080
000081 CGATAACCTT GTCACATTAT CATAATTCCC CAAACAGAAA AACGCATGCT CCAAATTGCA CCAATATTTG ATAATTTTAC 000160
000161 CTTGTTAACG GCTCACTGTC AGTATGTAGA GCACTACATT TTTTCCCCAT TACCTTTCTA TTGCACAGTC TATATTTCTT 000240
000241 TGCCTCAGAA AATGATAATA CATTCTGTAC AACATGTTTG TGTTGCACAA CCCCGTGATT TGAATATGGC TTTTTAACGT 000320
000321 CTCGCAGTTT CAGAAGCTAT CTCCTGAGCA GTGTGTAATT CTCTCCTGGC TGTTTGATGG TAATGGGAGC TGTACATGTA 000400
000401 TCTGGAGAGA GGAGAACCAG CCTGGGGACT CAAGATATAT TAAAGACTAT GCTCATGGAC ATCAATTCTT TCCTGTCCTT 000480
000481 TAGGGCAGTA TTCAGGCCAC ACGGTTCAAT AACGGGAAAG AATGTCGT
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Predicted Small Protein

Name NONHSAT038123_smProtein_125:316
Length 64
Molecular weight 7358.6264
Aromaticity 0.142857142857
Instability index 57.7938095238
Isoelectric point 6.36248779297
Runs 10
Runs residual 0.0137674117266
Runs probability 0.0402049107931
Amino acid sequence MLQIAPIFDNFTLLTAHCQYVEHYIFSPLPFYCTVYISLPQKMIIHSVQHVCVAQPRDLN
MAF
Secondary structure LLLLLLLLLLHHHHHHHHHHHHEEEELLLLEEEEEEEELLLLEEEEEELEEEEEELLLLL
LLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
LLL
PiMo ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii
iii