NONHSAT038123
Revision as of 21:43, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT038123 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
528 nt |
Genomic location |
chr14+:86027207..86029087 |
Exon number |
2 |
Exons |
86027207..86027633,86028987..86029087 |
Genome context |
|
Sequence |
000001 CGTGCAATTA GATCTTCTTG ACTAAGAAAA AATGCAGACA AGCAATTACT CCGTTACTTT AATTACTCTC CTAATTATAA 000080
000081 CGATAACCTT GTCACATTAT CATAATTCCC CAAACAGAAA AACGCATGCT CCAAATTGCA CCAATATTTG ATAATTTTAC 000160 000161 CTTGTTAACG GCTCACTGTC AGTATGTAGA GCACTACATT TTTTCCCCAT TACCTTTCTA TTGCACAGTC TATATTTCTT 000240 000241 TGCCTCAGAA AATGATAATA CATTCTGTAC AACATGTTTG TGTTGCACAA CCCCGTGATT TGAATATGGC TTTTTAACGT 000320 000321 CTCGCAGTTT CAGAAGCTAT CTCCTGAGCA GTGTGTAATT CTCTCCTGGC TGTTTGATGG TAATGGGAGC TGTACATGTA 000400 000401 TCTGGAGAGA GGAGAACCAG CCTGGGGACT CAAGATATAT TAAAGACTAT GCTCATGGAC ATCAATTCTT TCCTGTCCTT 000480 000481 TAGGGCAGTA TTCAGGCCAC ACGGTTCAAT AACGGGAAAG AATGTCGT |
Predicted Small Protein
Name | NONHSAT038123_smProtein_125:316 |
Length | 64 |
Molecular weight | 7358.6264 |
Aromaticity | 0.142857142857 |
Instability index | 57.7938095238 |
Isoelectric point | 6.36248779297 |
Runs | 10 |
Runs residual | 0.0137674117266 |
Runs probability | 0.0402049107931 |
Amino acid sequence | MLQIAPIFDNFTLLTAHCQYVEHYIFSPLPFYCTVYISLPQKMIIHSVQHVCVAQPRDLN MAF |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHEEEELLLLEEEEEEEELLLLEEEEEELEEEEEELLLLL LLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL LLL |
PiMo | ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii iii |