NONHSAT039519

From LncRNAWiki
Revision as of 21:45, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT039519

Source

NONCODE4.0

Same with

,

Classification

sense

Length

482 nt

Genomic location

chr14-:96756907..96758275

Exon number

3

Exons

96756907..96756927,96757151..96757272,96757937..96758275

Genome context

Sequence
000001 TATATATATG TTTGAAATGA AGTGCAAGGt ttttaaattt aattgttttt aatgtaaata tttaCTTAAG TACCATGAGT 000080
000081 AAAATTTGGT ATAAATTGGG TCATATGTAT TGTAAGATAT ATATTTTTAC TGTAAATATT TTAAGTGTTT TAGTATCAAT 000160
000161 AATGACTACT GCTTTGACTT TCAAAATAAC AATTATTTTA GATGTTGAGT CTCTTAATTT ACAGTAAGGT TAATTTGGCC 000240
000241 TTTTTTAATT TTGAAGGGTA CGCTAGCTGG GATTTTGATT GGTCTGGCTC AGTTAAACTG CTCTGAACTA AAGCTCAAGA 000320
000321 GGCTTTCCTA TCGACATGGT TTACTAGGCG TTGACAAATT ATTCTCATAT GCAATCACTG AGTGGCTTAA TGACATTAAG 000400
000401 AAGAACCAGC TACCAGGAAT CCTGGGAGGT GTTGGACCTA TGCATTCACT AGTACAATTA GTACAAGGCC TAAAGGACTT 000480
000481 GG
[back to top]

Predicted Small Protein

Name NONHSAT039519_smProtein_74:226
Length 51
Molecular weight 5811.0335
Aromaticity 0.12
Instability index 42.282
Isoelectric point 8.93218994141
Runs 9
Runs residual 0.0153216374269
Runs probability 0.0479008420184
Amino acid sequence MSKIWYKLGHMYCKIYIFTVNILSVLVSIMTTALTFKITIILDVESLNLQ
Secondary structure LLLEEHHHLLLEEEEEEEEEHHHHHHHHHHHHHHHLLEEEEEELLLLLLL
PRMN LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTToooooooooooo