NONHSAT039519
Revision as of 21:45, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT039519 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
482 nt |
Genomic location |
chr14-:96756907..96758275 |
Exon number |
3 |
Exons |
96756907..96756927,96757151..96757272,96757937..96758275 |
Genome context |
|
Sequence |
000001 TATATATATG TTTGAAATGA AGTGCAAGGt ttttaaattt aattgttttt aatgtaaata tttaCTTAAG TACCATGAGT 000080
000081 AAAATTTGGT ATAAATTGGG TCATATGTAT TGTAAGATAT ATATTTTTAC TGTAAATATT TTAAGTGTTT TAGTATCAAT 000160 000161 AATGACTACT GCTTTGACTT TCAAAATAAC AATTATTTTA GATGTTGAGT CTCTTAATTT ACAGTAAGGT TAATTTGGCC 000240 000241 TTTTTTAATT TTGAAGGGTA CGCTAGCTGG GATTTTGATT GGTCTGGCTC AGTTAAACTG CTCTGAACTA AAGCTCAAGA 000320 000321 GGCTTTCCTA TCGACATGGT TTACTAGGCG TTGACAAATT ATTCTCATAT GCAATCACTG AGTGGCTTAA TGACATTAAG 000400 000401 AAGAACCAGC TACCAGGAAT CCTGGGAGGT GTTGGACCTA TGCATTCACT AGTACAATTA GTACAAGGCC TAAAGGACTT 000480 000481 GG |
Predicted Small Protein
Name | NONHSAT039519_smProtein_74:226 |
Length | 51 |
Molecular weight | 5811.0335 |
Aromaticity | 0.12 |
Instability index | 42.282 |
Isoelectric point | 8.93218994141 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0479008420184 |
Amino acid sequence | MSKIWYKLGHMYCKIYIFTVNILSVLVSIMTTALTFKITIILDVESLNLQ |
Secondary structure | LLLEEHHHLLLEEEEEEEEEHHHHHHHHHHHHHHHLLEEEEEELLLLLLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTToooooooooooo |