NONHSAT040223

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT040223

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1290 nt

Genomic location

chr14-:104335739..104346641

Exon number

3

Exons

104335739..104335925,104336208..104336349,104345681..104346641

Genome context

Sequence
000001 GTCGGAGATC ATTGTTCCCG GGCACAGGTC CCAAATTCCA GCCCACGACC GAAGGCCAAA CGTGCCCGTT AATGATTAAA 000080
000081 CCTCTGGAGT CAGTGCTCAG GGACACAGGC AGGGAGCAGC CCGGAGAGCT GCCGGTCAAG GTGCCCGGCC GGGTGGGGGT 000160
000161 GGGGCAGCAG CCAGGCCCCG CCCAACAGGA ACCAGTTCCT GCCCAAAGCA GGAGGGGAAA GGCTTTTCCA CCAAGGGAAA 000240
000241 GCTAAATATT GTCTAAATCC GGCACCCAGG ACGACACACA GGCTTCCCAT TGTCTGCCAC ACAGCAGGTC TCGGCCACGG 000320
000321 CCCAGGTTGC ACCCGTGTGA GGTCAGGGAG GGTGGAGCAT CCCGGGGAGG GGGCCTGCCC CCACCGTCTT CCTCTGCACC 000400
000401 GAGGCACATT CTTGGGAAAG GTCTTATGTT GCCAAAAGGG CTTAACCACA TGACACAAGT GAGCGTAGGT GGGCACCAGT 000480
000481 GAGGAAAAGC CATCCTTGGC AGCAGAAGCC GGTGCAGGGG CGACGCTTCA GACCACAGGA AGCGAGCTCT CCACGGTGGC 000560
000561 CGAGGGCTTT TCCACTCGGC GAgcctgggc accagtccca gctctgctac cttttcgctg tcgtaggtta tctcagtttc 000640
000641 ctcctctgta aaatgggaac gtggtacctg acctcaaggt caccaagagg tctaccgagt ggcccctgtg aaacacgtag 000720
000721 tgccggagcc ctggtacctg caagctctca ataCCCGGCG ATCACGTTCA TTACGATTAG GATCACCAGA TTCTGTTCCT 000800
000801 TTGCGAGATC CTTTCCAACT GCACTTTCAT GTCAGTGTTC GTTTGCAGGT TGATGTTGGA CCGTATTTAC ATTCAGTGTT 000880
000881 TGGGGCTGAC CGGGAAGAAA TCTGAAAGTG GAAGAGAAGG GAAGGCACCG GTAACCTCGT CTTCCCAAGA GGAGGTCAGA 000960
000961 GGGCAGTTCA GACATTGAAG GAAGAGACAA agagccttga atgtcacgaa aaggaggttg gactttatcc tgcaggcaat 001040
001041 cagaagccag aaaggtttca ggatggatgg gctgatcaga tttgagtttc aacaggccac tgtGCTGCTA CAGACACCCA 001120
001121 GACACCGGAG CTCCAGCCGG GGCAGGCTGC AGGATGCCCA GCCGTGTCCC CAGGATGCCC TGCACGCTGT CCTGAAAACT 001200
001201 AACCTGTAAC TGCAGCTCTT GGAGCCTTCC GGAACCCAGA TCCCCACCTG AGATCAAACC AAAGACCTGG TTTAAGGTCC 001280
001281 CTGGTTTGGC
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Predicted Small Protein

Name NONHSAT040223_smProtein_71:244
Length 58
Molecular weight 6140.9458
Aromaticity 0.0175438596491
Instability index 77.6245614035
Isoelectric point 10.2366333008
Runs 7
Runs residual 0.0311403508772
Runs probability 0.0287177934237
Amino acid sequence MIKPLESVLRDTGREQPGELPVKVPGRVGVGQQPGPAQQEPVPAQSRRGKAFPPRES
Secondary structure LLLLHHHHHLLLLLLLLLLLLEELLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -