NONHSAT041027
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041027 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
8993 nt |
Genomic location |
chr15+:25326238..25359068 |
Exon number |
16 |
Exons |
25326238..25326371,25327736..25327852,25328543..25328674,25330337..25330469,25332614..25332746,25334761..25335013,25336737..25336866,25338981..25339121,25342468..25342586,25343864..25343975,25344292..25344425,25349006..25351441,25352619..25352735,25353057..25353185,25354145..25354550,25354702..25359068 |
Genome context |
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Sequence |
000001 GTAGTGTTGG TGTAAAAGGC AAACCCGTGT CATGAGGGAT GGTCATCATC TTGTGTGATC CTTGGAGATG GCAGGAAGCC 000080
000081 CTGGACATAC ATGGTGTGGG GGCTCCTCCA GAGGCTGTTG GGATCCTCCT GGATGTGGTG TGGGCATGGA AGGAAGGCCA 000160 000161 GTGGAGACAA TGGATGATCT TGTTCTTAGC AGATCACTGG ATGTGGCAGG GAGTCCTAGG ACATGTGTGG TGTGGGCTTC 000240 000241 TTCAGGTGCT GGTGGTGTTG GCATGAGGAA AGGAGGTATC TTCGAGGGAC AATCTTCTTC TTGTGCGATC CTTGGAGATG 000320 000321 CCATGAGGCC CCTGGACACA TGTGGTGTGG GCTCCTTTGG AGGCTGTTGT ATCCCTTCTG AATGTGGCGT GGGCATAGAA 000400 000401 GGAAGGCCAG TGGCCACGAG GGACAATCTT GGTCTTGGGA GATCCTGGAA ATGATAGGGA GTCCCTTGAT ATGTGTGGCA 000480 000481 TGGGCTCCTT CAGGTGCTAG TGGATTCCTT AGGATGGTGG TGTTGGCATG AAAGGCAGGC TTGTATCATG AGGAATGATT 000560 000561 GTCATCTTGT CTGATTCTTG GAGATGGCAG GAAGCCCCTG GAAACACATG GTGTGGACTC TTTCACAGGC TGTTGAAACC 000640 000641 CTCCTGAATG TGAGGCCAGA GACAGGCAGA CAGCAGATGT ATTGCAGGGA GCTGGATGAC ATGGCCCTTG GAACCTGTGC 000720 000721 ACATGCCTGC CTTTCTGATG CACGTCCATG TTTTCTCTGC ACCTCCCCGG TGGTGTTGGT ATAAAAAGCA GGCTTACATC 000800 000801 AGCAAGGGAT GATTGTCGTC TCATGCGATC CTGGGAGATG GCAGAAGTCC CGGGACACAT GGAGTGTGGG CTCTTTCGGA 000880 000881 GGCTGTTGGA TCCCTCCTGA ATGTGTTGTG GCCATGGAAG TAAGGCCAGT GGCTACGAGG GACAGTCTTC ATCTTGGGAG 000960 000961 ATCCCTAGAG AGGGCAGGGA GCCCCTTGAC ATGTGGAATG TGATCTCTGT TGGGTGCTGG TGGATCCCAC AGGTGGTCTG 001040 001041 GCATGGAAGA AGGCCAGAGG CTGCGATGGA TCATCTTTGT CTTGGGAGAT TCCTGGAGAT GGTGGGGAGC CCCTGGGCAC 001120 001121 GTGCAGCATA TGTGGCGTGG GCTTCTTCAG GTGCTGGTGG ATCCCTCAGG ATGTTCATTG TGGAACCAGC ACAGATTTTC 001200 001201 ATACGAAAGT TATTTCTTTT TAACCTCAAA AAGTGACAGA ATGGAGTGTA TCATGAAAAA GTCTGACATC AAAACCTCAA 001280 001281 AATGTGATAT TGATTGGGTG AGATAGAATT CCATGGAATT TCATTGCCAA ACCAGTGAAG TGCTAATTTT GACATTTGTA 001360 001361 CCAGCTAACG TAGCTGTGAA GAAACACACC AATACACTTC TAAGGACAGC ATAGACCAAG ATCTAGGTTT CATATGGATG 001440 001441 AATTTATTCT TCCCTTTGAG GCAAGACAAG AAGGAAAGAA AGTATTGGGA ATAATGCTGC CCTCCCATCC TCAAGGGCCA 001520 001521 GTGGGAACTC TAATATTGAT TGGTTTTCAC AGAATTCCAT GGACTTTAAC TGCTGAACCA ATGATGCACT GATTTTGTCA 001600 001601 CTTGTACCAG CTAACGCATC TGGGAGGCAA CAAAACAATA CTCTCCTGAG GTAACATCGA ATTTTTAGTA AATTCATTTT 001680 001681 TGTGTGTTGT TTTTATTATT TTTTTAAGTA ATTGAGAATT TCATTAGGTG TGCAAGGAGT CACTTAATAC AAATAGTATT 001760 001761 AGGCATTCAA TACTCTCATG AGATATCTGA GCCTTCAGTT TCTTTTATTT TAACATTTTA CATTTTTCTC AACTTTAACA 001840 001841 TCAGAAACAT CCTATAAGTG TAATAAAATT CTTATACTTT ACATATAGTT ACATAGTAAA TCCTCCTGTC TTATTTAAGT 001920 001921 TTGAAAAATG AACATGTATA CTTCTCATTC CCATGTATAT AATCTCTTCC CACAGAATGA GGTGGACCAA GAAACTGGGC 002000 002001 TTCATACGGA TGAATTTATT TTTTTCCCTG TGTGGAGACA TAAAGGAAAA GTATAGTGAA TAATTCCGCC TCCCACCCAC 002080 002081 AAGTCCCCAT GGGAATTCTC ACATGTTAAA AAGCATTTTG TCCTGAAAAT AACAACAATT TTTCTTAGGG AATCAGGACA 002160 002161 CTCCAATGAC AGTGAGACTC TGGCTATGCC AGGCAGCCAT GGGCTGGTCA TTGTGCTGCT GGTCTCCATG ATTGAATAGT 002240 002241 GTGGGTCATT GGTGACAGAT AGCTATGTGC TCAGTGTCTG CCACATATCT CAGGTTCAAA GTCCCTTTTA TAAATGTGCC 002320 002321 TGGATGGATG ACGACTTAAA AATGAATCTC GTTGGAATCT GAGCAAAACG AGTGAGCAAA CCACTTCTGT GCAGTTCTGT 002400 002401 GAACTGAGGT CAAGCACAGG GACCATGCCA GGCAAACACG TGCAGAGAGT TCAGTTTGGT CAGCAACTGG TACCAAAATG 002480 002481 GCCTGTGGTA TTGGAAAACA AACCCACTCA CATAGCTTAC AGCACATGAA TTGTACAGAG GTCTGTATGT GTTTGTATAT 002560 002561 ATTTATATAT GTTTGTGTAC ATATATCTTT GGGGATTATA TGGCATTTCT TTCAGTGTTT GGCTGGCAGT GTCCATACTC 002640 002641 TCATAGTAAA CAGAATTACA CAAGAGTAGA GGGAACAGTA GGAAATGGTT TTGCCTACCC TAGAGTCTTT TATACATGTT 002720 002721 TTTAGGTGCT ATAATCTTGT GTGTGAGGTC AGTCTCTCAG GTTCATTAGA TGGACAGTGT AAAAGGTATT ATGAGGTTTT 002800 002801 ACATATTATT TATCTATTAA GTAAAAGAAA TATATGGAAA TTGAAGAGTA GCTTTTATCT ATTAAAGAAA AGAATGTATG 002880 002881 GAAATTGAAG GGTACTTTCT ATTTGTGGAA AGTCTTAACA TTTTAATTTC CTTATTGATC TTGTCACAGA AGTTGGAATT 002960 002961 TAAGTTTTGC CTGTCACTCA AAGAGAAGCT TTTTAGACAT TTGATTAAGG GATTCTAGTA GATGCTATAG TAAACATTTC 003040 003041 TAATTGTAAA ATGATTAAAT TTGCAATTCA TAGAGTTTTA TGTGGATTTC ATTGCCTGAT ATTCATTATT TTTATTAGTG 003120 003121 GGTTTCATAG ATGTTTAAAG GGAGATCCTA GTTTTATTGT GTGATACTAA GGGAGGCCTT TTGGTCTTAG AAAACTGACT 003200 003201 TTCAGTACTA CCCATTTCCA GGGAGTGAGC ATAATTTTTA TTCTCATACC ACATGGGCAA GTGAATATCT ATGGTTTATT 003280 003281 TCTTATAACT CGTCATTAGT AATTATGAAA GTAAGAAAGT TGACAAATGA AACTCTTTTA ATTATGAGGG TTTCATTTGT 003360 003361 CGACTTCCTA CTTCCTCAGT GTGCTTTGTG TATTGGAGGT AATACTGGAA TTGCATGGAA TTCCTACTGC TGCTCCAGTA 003440 003441 ACCTGCTGAT TTTGTCACGT GTACCAGATT CGTTGTCTGG CAATGAGAAC AATACACTTC AGAGGTAATA TTGCAATTTT 003520 003521 TAGTAAGTGC ATTTTTCCTG GGTTCGTTCT ATTATTTTAT TTTAGCAAGT AAGATTATAA TTGGTTTTTC AAGCAGTCTG 003600 003601 TTAATCCAAA TGGTGTGAGG CCCTAATAAT CTGGTTAGTC ATCTGAAGTT TCTGTGTTCT TTGTACAGTA TTTTTATACT 003680 003681 TCCTCTGTTT TCAAATAACA TTAGGATACC CTACTAGCAA AATAATTTAG TATATTTTAT ATACTTGTGC ATAGTAAGCC 003760 003761 TGTTGTATAT GTACACTATT TGCATGGTTG GCAAATTACA TTTGCACTTT TTATTTTTCT ATAATTTTTT CCTATTTTCA 003840 003841 AAGGTTAATG TGGACCAAAA ACTAGATTTC ATATAAAAGA GTTTATTCCT TCTACTTGAG GTGTGACATG AAGGAAAGTA 003920 003921 ATGGAAATAA TTCTGCCCTC CCATTCTCAA GGGCCAGGGG GAATTCAAAT ATTGAACGGA AGTGATTTTG GAATTGCATG 004000 004001 GAATTCTCAC TGCCATCCCA AAGAAATGCT GATCTTGTCA CTCTTACCTG TTTCATTCCC TGGGGGCAGA ACAAAAGGAC 004080 004081 GCACTCCAAA GATCGGCATG AACCAAGAAC TGGGTTTCAT ATAAAATATT TTATTCTGTC CTCTTGAGAT GTGACATGAG 004160 004161 AAAAGTATTG AGAATACTTC TATCACCTCA TCTTCAAGAA TCCGTAGGAA TTCTCCCATG GTGGACTTTA CGGTTAACCT 004240 004241 GAACAGGTCT TGGAAAAAGG ACTTTAAACA TTCTCCTGTT CTGTGGAATA AGTATACTTT TTTCTGGACA TACACCTTGT 004320 004321 CAGTGAGTAT GTATCATAAT TCCTCATAAC TTCTTATCAG GAAACATTCG ATGTAGAAGA TTTCTTTCTC AACTTCTCTA 004400 004401 ATTGCCCCTG TGGTTTGCAG GTTCCATGTG ATACTAGAGT TGCATAGATT TTTAACCTTT ACGCCAATGA AGATCTGAGG 004480 004481 CAAACATTGC CCCTTTTTTA GAAGTTTGCA TTTGTCACTG ATAACTGTAA TAATTGATCT TGTTGAAAAG CCTGGGAAAT 004560 004561 GAAGATCTGA TATGTCACTT TTACCGGCTT CCTCAACTGA AAAAGAATAC AATGAAACAC GCTGAGAATT TTTGTGCTTT 004640 004641 CTCAGTCTTG CTGATGATCT TTCTATGGGC CTGAAGCGTG GAGAGTGCCA GAGAGGCTGA TCCTCAGCAG TGTGGCAGAG 004720 004721 GAAAGTTGGG TGCGACTAAG GGGTATGCGG TGCCCACATG CCACTGGGTC CTCAGCAGTA CCACCTGGTG AGCGTCACTC 004800 004801 TTGAGAGCTG AGAGTAGGTG GGAAGCAGCT CATGGTGAGA GGGTTCAGAG GCCGCCTTTC CCTCTCTGCG CACTGCCCAG 004880 004881 TTCTTCTAGT CACATGTCCC GGGACAGTAC CATACCTGTG TGTGTCCTGC CTGCATTGCT GTGACCACTT TTAGTGGAAT 004960 004961 CAGGTGCAGT GCAGCTCTGC AGCTTCTGCA AATTGCCACG CTCCCACTCT CAAGCAGGTT GAGTGCTACG AGTGATTTTT 005040 005041 AGACCATTTG TTTATTCCCT TATCATGGCT TTTTGTGACT TCTTCCTCCC CAGTCCGTTG GGTCACCTTT AAAGGTAAAG 005120 005121 TAATCCTGAG GTGGTTGAAT TTACGGAAAT GCTATGCATT ATTGTGAATG GGATGTTCAC CGGGCCAACA TCTTCTTGGA 005200 005201 ACTTTGAGCA AACTGATAGT CTGGTTGCAC ATTTGATTTG TCTGGCAGTA AATGTTGGAC AGTATTTGGA CTGATGGAAG 005280 005281 CTAGAGACAA ACACATTGAC TATTGTTGAA TAACACTGGA AACATCTTAG GAGAGCAGTA CATTAGCTAA TTTAATAGGT 005360 005361 ACATAAACTG AATCCCACTG TCTTGTGCTT GACGGACCAG CAGACACATA TGCTTGTATC GTTCTCATGT TTCTACATGT 005440 005441 TTACCCTATT CCCACAGGTC AACAAAGACA AGGCACCTAG CCCCACATGA AACTTTATTC CTTTCCCTTT TGAGATGTGA 005520 005521 CATGAAAGAA AATAACAGAA ATGATTTTTC CATCCCATCC TCAGGGACCA GTGGGAATGA ATTTTACCAT CCCACCCTCA 005600 005601 AGGGCCAGGT CAGGTCGCTA AGCATTTTGT CACTAAAATA TTGCCCTTTT TTAGGGATTA TGTAATACTC TATAAGGCAC 005680 005681 TGTCTGTGCT GGGCAGCATG GAGCCTGGGT CATTGCTGTG TTGGGGGCTT GGTCTCCATG ACTTAATAGG GTGTATCAGT 005760 005761 GTGTCCCAGA GAAGTGTACT CCAGAGTGCT CATTTTCTTT CATGTTTCTG AAGCAAACAG TGCCCCCTTT TTTAGAAGTT 005840 005841 TGCATGTGTC ACTGATAACT TTAATAATTG ATCTTGTTGA AAAACCTGGG AAAACAGTGA GTTAAATAAT AACTTCTCTG 005920 005921 AACATGAGGT CCAGCCCAAT TACCTGCCCT AAGCAAACTA TATGGAAGGA GAGTTCAGTT TGTTCAGCTA TGTGGTCCCA 006000 006001 GCAAGGACTG TGGTACTGGA AAACTAACCA GCTTACATGC ACTAGAGAAG TAGAATTGGA CAGTGATCTG TAGGTACCCA 006080 006081 GTTTGGAGAT GAAATTGCAA CTCTGAGTTC TTGATTGGCA ACATAAATAC GTTGATAGTA AACAGACCCT GGGGAATCAG 006160 006161 CACTTGAGTT GTGAAAAGCG GGAAATAGCT ATGCCTACAC TAGAGCCATT CACACTTTTG CTGGAGCTGC AATAATCTTC 006240 006241 TAAGTCATGC TTGCTCTCGT GAGGGCAATG AGATGGTCAC AATCCAAGGA GAGTTGGGGT TTTCACTTTT CATTTCTCTA 006320 006321 TTAAGTGAAA AAAGTATATG AAAATTGAAA AATAGATATT ACTTATGTAA TCTTCACAGT ATAATTTGCT TGCCAAGCAG 006400 006401 TCACTGGGAT TTAATCAGTT TCTTTGTCTT TCGTTTTTCT CATAAGCTGA GAGAGTAATT TTGTGTGCAC AGAAGTACTG 006480 006481 TCTTCAGCTA CATGCTGCAT TAAACATTCC TAGATGTGAA ATGATTAAAT TTCCAAGTTT TTAAAATGTG GATTTTTCTG 006560 006561 GCCACTTTTA TATCTCTTCA ATGGGTTTCT AATGGATTTA AGGAGAGAGC CTAGTCATGA TGAATGGTGT TGTGTTGGGT 006640 006641 ATGCTGAGGA AACTTTGAGA CCAATGTTTC AGAAAAAATT ATTTCTATAC TGTCATGTTT CAAGTACCGA GTATTGTTCT 006720 006721 TGTCATACAG ATGGTCCAGT GAACATCTCT GGTGAATTCC TTACAACCAA CCTCTTGTTA CTAAATATTC CATTAGGAAT 006800 006801 GTTTTGTTTC TCAACTCCCT GATTTCCCCT TTATAGATTG GAAGTGATAT TGGTGGAAGA CAACATTTTG CCGCTTGGAA 006880 006881 TTCTCACCTC CACACCAAAG AAGTACTGTT TTTGTCATTT GCACCAGCTT CTTTCTCCAG GAAAGATCAA AACGATGCAC 006960 006961 TGCAAGGTTA ACATCCAATT TTTAATACAT GTAATTCCCT GGATTATTTT TGTTGTGTTA TTAAATAACT TAGAATTTTT 007040 007041 TTTACAAAGT CTGTTGAACC AAACACTGTA AGGCATTAAT AACCTGGTGA GTTATTTGAG GCCTTTTTTC CTCTCCTAGA 007120 007121 ATTTTTGCAC AATTTATATT TTGAATAATA TCAGAGACAT CCTAGTAGAG TAATGAATTA GTACATTTTA TATGCAGATA 007200 007201 CATAGTGAAG CCTCCTTTCT TATGCATATT TGACAAATGG ACATGTATAT TTCTCATCTT CCCATATTTT TACTCCATTT 007280 007281 CCACAGGTCA TGTAGACCAA AATGTGAATG TCATATGAAA GAGTTTAAAC ATTGCCCTTG AAATATGACA GAAAGTATCA 007360 007361 GAAATAATTA TACCATTCCA TGCTCACAGG CCAGTGGGAA TTCTCACAGT AAGCATTTTG TCCAGAGAAT ATTCTTCTTA 007440 007441 GGGAACTATA ACATTCCAAT GATAATGGTA GTCAGCCATG TGGCTGGATC ATCGTTCCTG TATCCTGGTC TCTATGACTT 007520 007521 AGTGTGGTGA TGGTGTCATT GTGTCCAAGT GTGACAGAAT TGTTAGTGTG TAGTGTCTGT CTCCTATCTC AGGCTCACAG 007600 007601 TCCCTTTTAT AAACATGCCT GGATTGATGA TGGCTTCAGT ATCTTTTGGA AATCTGGACT GAGCAATAGA ATTGCTTCTC 007680 007681 TCAAATTGAT TTCAAGTCAT ATAAAAGGCC ATGTTACACA TATATTGTTA ATCTGAGGGA GGCTGTGATC ATTTAAGTTG 007760 007761 TATTTTATAA ACACTAGGAC CACCAGTAAG AAAACAATTC AAAAAATATT AAAAGAACAA CCAAAGAATT AAAATAGAAT 007840 007841 AACCGAAAAG ATCTGTTTAA CACAAAAGAA GGCAGTTAAA GATGAACAGA GGAACCAATA AGACATATAG AAAACAGATA 007920 007921 GGAAAATGAC AGACATAAAC CCAGCCATAT GACAATTATA TTAAATTTTT AAGAGATTAG GAAATTCCGT TGTTTTTTAA 008000 008001 ACATGAGCAA CTATACGCTG TCTACAGAAG AGACACTTTA GAACAAAAGA TACAAATAGT TGGAAAGTAA AAAGATGGAA 008080 008081 AAAGCTATAT CCAGCGAATC CAGAAGAGAG CAGAAGTGGC TATTCTGACA TCAGAAAAAA GAGACTTTAA GATAAAGTAT 008160 008161 TGCTAGAGAG GAAGAAGGAT AGTATTTAAT GATAGAAGGG TTAATATGGA ATATGTAACA ATTACAATCA TATCAGCACT 008240 008241 AACAACAGTG CCCAAAACTA CATACACTGA AATTTAACAT GATTGAGGGG ATCAATAGGC AATTCAACAA TAAAAGCTTT 008320 008321 TGTTCATACC CTCTTCTTAA TCAGTGATAA GTCAATTAGA TAGAGCATCA TTGAGGTTAC AACATACTTC AGCAATGTTG 008400 008401 TCAACCAATT TGACCTGAGA TAGATAGATA GACAGTTAGA CAGACAGACA GACAGACAGA GAAAACTTCA CCCAACAACA 008480 008481 GAAATACAAA TTATTTTCAA GCATACCTGG AACATTCTCC AGGATAGAGT ATATGTTAGG CTATAAAACT GTACTCAATA 008560 008561 AATTTAAGAT TGAAACCATG TAGAGTATGT TGTGTGACCA TAGAGGAATT AGAAATCAAC ACAGAAATAA ATTTGGAGGT 008640 008641 CACAAGATAT TTGGAAATTA ACACACTTTA CAGAGCCCAT TGGTCAAAAA TATATATATT AAACTAGAAA GGCCGGGGGT 008720 008721 GGTTGCTTAC ACCTGTAATT CCAGCACTTT GGGAGGCGTA GGTGGGCACA TCACTTGAGG CCAGGAGTTC AAGACCAACC 008800 008801 TGGGCAACAT GGCAAAACCC CATCTCTACA AAAAAATACA AAAAATGAGT TGAGCATGGT GGTGCATGCC TGTAGTCCCA 008880 008881 GCTACTCAGG AGGCTGAGGT AGGGGAATCA CCTGAGCCCA GCAGGTAGAA GCTGCATTGA ACCAAGATTG CACCACTGCA 008960 008961 TACCAGCCTG GGCGACAAAG TGAGACCCTG TCT |
Predicted Small Protein
Name | NONHSAT041027_smProtein_38:265 |
Length | 76 |
Molecular weight | 8700.2549 |
Aromaticity | 0.133333333333 |
Instability index | 41.852 |
Isoelectric point | 4.92938232422 |
Runs | 10 |
Runs residual | 0.0156028368794 |
Runs probability | 0.0185037979156 |
Amino acid sequence | MVIILCDPWRWQEALDIHGVGAPPEAVGILLDVVWAWKEGQWRQWMILFLADHWMWQGVL GHVWCGLLQVLVVLA |
Secondary structure | LEEEELLLLHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHH HHHHHHHHHHEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHH HHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTT TTTTTTTTTTTTToo |