NONHSAT041396
Revision as of 21:52, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041396 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1076 nt |
Genomic location |
chr15+:31074484..31076297 |
Exon number |
2 |
Exons |
31074484..31074583,31075322..31076297 |
Genome context |
|
Sequence |
000001 cctgggtttg ggtggttctc ctgcctcagc ctcccgagtg ggtgggactg caggcatgct cagctaattt tgcttttttt 000080
000081 tttttttttt tttttttttg cacctggctt cacctagtgg atcccacgcc agggctgtgg gtggagctgc ccgccagtcc 000160 000161 ggcaccatgc gcctgcactc cttggccctt gggcggtcaa tgggacctgg cgctgcggag cagggggccg cgcctgtttg 000240 000241 ggaggctcgg gcggcgtcgg agcccaccga ggggagaggg ggtctcgagc atggcgggct gcaTTCTTac atacaaaaat 000320 000321 tgagaaaatt catcaccagc agaattgcac tacaaaaata ttgaaggaaa ttattcaggc agaaaaaaat gatgagaaga 000400 000401 aaattaaatc tatacaaaaa aacaaagaat aaaaaagtaa atatgtgaat aaatataatg aattgttttc cttaattttt 000480 000481 gaacctattt taaacataag ctgctgttgt ttttcttttt gagacacagg gtctcactgt gtcacccaca ctgacgtaca 000560 000561 gtggcaggat tacagctcac tgcagtctca atctcccagg ctcaagcaat ctttccacct cagcctccca agcagctgtg 000640 000641 acaacagaca tgtgccacca tgcccagcta attttttttt aatttttaat agagataagg tctcattatg ttgcccaggc 000720 000721 tgatcttgaa ctcctggtct caagtaatcc tcctgccttg gcctcacaga gtgctgagat gacaagcatg agccactatg 000800 000801 cccagccaaa catagctgtt taaagcagaa ataacaacga attgtgagct ttataacata tgtagacata aaatgtatga 000880 000881 caatattagg aagggtagaa ggagaatgct agattattct ggtgtgaggt tcttaGGAAT TTGCATATCA TTATGTACAT 000960 000961 TATATAAATA AGGCTATGAT ACAAAGTTCT AATATACATG AGGTTCAtat atatgaattt gtatatcatt acttgaaagt 001040 001041 caactgtgat aaattagagt tatacactgt taaAAA |
Predicted Small Protein
Name | NONHSAT041396_smProtein_872:970 |
Length | 33 |
Molecular weight | 3842.5836 |
Aromaticity | 0.125 |
Instability index | 78.9 |
Isoelectric point | 9.89178466797 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.038067479244 |
Amino acid sequence | MYDNIRKGRRRMLDYSGVRFLGICISLCTLYK |
Secondary structure | LLLHHHHHHHHHHHLLLLEEEEEEEEEEEELL |
PRMN | - |
PiMo | - |