NONHSAT041651

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT041651

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1022 nt

Genomic location

chr15-:36718457..36720592

Exon number

2

Exons

36718457..36719013,36720128..36720592

Genome context

Sequence
000001 TTTCCCAGTC CCTGCTGGTT TCTCTGTGTG AATATTCACT CTAGCTCCTA TTGCCTGGCA GACTTACTCA TTATATCCTC 000080
000081 AATGGAAATT CCAGAGAGGG ACAACTGGAT TAGTCCAGTG ACTCATGGAG GAGCATCTGC TTTTGATGAA GTGCTTTCTC 000160
000161 TTCAGTCGGG CCAATCACGA TTGGGAGGCA GCGTCTTGAA CGGTGGAATA TGAGTAAGAA CTTCTACAGA AGAGGCCAGG 000240
000241 GCTTCCCAGA AGGGGGCTAT TCAGTAACAG Taattatcag caacctctat ttagcacttg agcacatatc taaatatttt 000320
000321 acatatgtga aaattcattt aattttcata acaTGCATAA TTTAATTGTT TTCATTTATT tgacaaatat atacagcgtt 000400
000401 gctctgtagc aggcactggt cttagtacct tacagatgtt gactccgttg ataaaaactt acgagTTAAG GAAAGACACT 000480
000481 ACCATTCAAA TAGACAAGCT ACATAAGACA GACTACGTAT ACACTGGAAT CAGAGTCTCC AATCAGAAAG GGATTTTGTG 000560
000561 TCTCTTTTCC TGTTAAGAAC CTGGTTTAGA CAGCTCTGCT ACCTATAAAC ATTTGCTCTA ATCAATTAGA GAAGGAGAGC 000640
000641 CTAAGAAATG GTCATGCAAA ATATTCGGAC AATGTCACAT GATGCCTGAA GACTGCTCTC ATTTTAACTG GGATAAAGAG 000720
000721 GACATTTCTC CATTCAAGAG CTGCTTCTGA TTGTTCTATG TTTCTGATGC ATTTTTACTA ACGCAATACA TAGGGTAATA 000800
000801 AGATACTCAT GTTACAGACA CATTATGTAA TAGTCTGTAT CGTTTATATC CTTATTTGTT TTCAGGAAAA TCAAGTTTTA 000880
000881 TTTTTACTTC TGTGAAACAA TGTCATTTCA ACTTATTTAT ACATATTCCT TTATCAGGAA ATAATTTTAT CCTGGATATC 000960
000961 CCTTTAATGT CTTGCAAAAT GTCTCCCCAT TCTTTTTCAT CTCTTAATAT ATTTTTCCCA CC
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Predicted Small Protein

Name NONHSAT041651_smProtein_209:364
Length 52
Molecular weight 5945.9481
Aromaticity 0.176470588235
Instability index 41.7178431373
Isoelectric point 9.30169677734
Runs 8
Runs residual 0.00262085032033
Runs probability 0.049980127186
Amino acid sequence MSKNFYRRGQGFPEGGYSVTVIISNLYLALEHISKYFTYVKIHLIFITCII
Secondary structure LLLLEELLLLLLLLLLEEEEEEEHHHHHHHHHHHHHLEEEEEEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToooooo