NONHSAT042350

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT042350

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1437 nt

Genomic location

chr15-:49017335..49022041

Exon number

2

Exons

49017335..49018009,49021280..49022041

Genome context

Sequence
000001 AAAATAAACA CCTATATACC CTGCATTTAG ATTTACCAAT TGTTTACTTT CTACATTTGT TTTATATTTG TCTGTAAATA 000080
000081 TACATATGTA TGCATGTACA TAGTATGTAC ATGTATATAA AAACATTTTT CCTTAACCAT GAAGATTATT TGCAGACACC 000160
000161 CTGAGTATTC CTTCCTAAAT ACTTCAGCAT ACATTTTCTA AGAACAAAAA CATTTTATTT CTTAAATACA ATTGTCATAT 000240
000241 TTAGGACATT GAATATTGAT AAATATTTAT ATACATATAC ACTTAAAAAA TTTTTTTTAT TTAGGAGATG GGATCTTGCT 000320
000321 CTGTCACCCA GGCTGGAGAG CAGTTGCTCA AATCACTGCA ACTGAACCGA GACTTCAACT GTTGGGTTCA AATGATCCTC 000400
000401 CCCGCTCAGC CTCTTGAATA GCTGGGACTA CAGGTACACA GCACTGCACT TGGCTAATTT TTAAATATTT TTGTAGACAC 000480
000481 AGTGTCTCGC TATGTTGCCT GGGCTGGTCT CAAACTCCTG GGCTCAAGCA ATCCTCCCAC CTTAGCCTTC GAAAGTGTTG 000560
000561 AGATTACAGG CGTGAGCCAC TGTGCCCAGC CAACATACAT ACATTCTATA TTCAAATTGC CCTAATTGTG ACAATAATGT 000640
000641 GTTATAACTT TTTTTTAGAT CTTTGCTGTT CACCTTCAAG CTGAGGACTT ACCACTTTTC TTCGATTATG AAAAATGCTC 000720
000721 AGCCAATAGC TATTCATTAA ACAAATATTT ATGAGGTGTC AATCAATATC TTGGATAAAG AAATCTTCCT TCTTAGAAAG 000800
000801 TGTACGATTC CCAAACGTTT TACAAGAATG GCTTCTTGCA TGGTAGAGAT CTCCATCAAG CCAAAGGGCA AATTCTCCTC 000880
000881 CTCCACCACC GAAAGCTAGT GAATCCATGT CTCCTTTGAT AAAAAACATG TTATCTCCTG TCCACTTAAA GACCTCAAAC 000960
000961 TCTGGACAGA ATGTAAAAAC AAAGGTCTCT CCAGTACCAT AAAAGCCATC ACTCACTTTA AATGGCTCAG CTGCTAACGC 001040
001041 ACCAAAAACC TGTCCATCAC TGTCTTTAAT TACCATCAGC ACTGGGGTGT CTAAACCTGT CATTGTTCGA TAAAGAGTTT 001120
001121 TCAAGCAAGC TTGTGCCATG TTTTCCAGTA CCATAAACAA GAGTCCGTGG ATAGCCAATT GTTCTTGGTG GAAGATGCTT 001200
001201 GGTAAGCTTT TCAATTTGAT CTGGCAGTAA ACTTTTCATT TGAGAATAGG TTTAGGTTTA CCAAAAAGTT GCAAAGATAT 001280
001281 ACAGAGTCTC TATACCTCTC ACCCAGACTC CTCTGTTGTT AATGTCTTAC ATCACTATGG TAACTTTTTC ACAACTAAGG 001360
001361 AACCAACATT ACATTTAAAT ATAGATGTAT TTTTTTTTTC TTGTGACGCT AGAGGCCATG GCTTTAATCC CTATACT
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Predicted Small Protein

Name NONHSAT042350_smProtein_89:163
Length 25
Molecular weight 3046.498
Aromaticity 0.208333333333
Instability index 94.7041666667
Isoelectric point 6.20880126953
Runs 6
Runs residual 0.014880952381
Runs probability 0.0233174350822
Amino acid sequence MHVHSMYMYIKTFFLNHEDYLQTP
Secondary structure LEEHHHHHHHHHHHLLLHHHLLLL
PRMN -
PiMo -