NONHSAT044023
Revision as of 21:57, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT044023 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
584 nt |
Genomic location |
chr15-:56755978..56757283 |
Exon number |
2 |
Exons |
56755978..56756445,56757168..56757283 |
Genome context |
|
Sequence |
000001 AAACACCCGA GCGCGCGCAG CCAGGTGCGC TCCTTGGGGC TGCTGGCTGC TGCGTTTGCG GCGGGAGGTG GTGGCCGCGG 000080
000081 TCCCACGAGA GGGGGTATTT TTCGTCAGCC AAGATGGGTT CCAAAAGGAG AAATTTGAGC TGTAGTGAAA GGCATCAGAA 000160 000161 ATTAGTAGAT GAAAACTACT GCAAAAAATT ACATGTCCAA GCTCTAAAAA ACGTCAACAG TCAAATCAGG AATCAAATGG 000240 000241 TGCAGAATGA AAATGATAAC CGTGTTCAGC GCAAGCAATT TCTCAGATTA TTACAAAATG AACAATTTGA GTTGGATATG 000320 000321 GAAGAGGCCA TTCAAAAGGT AAGTTTTACT ATTCATTGTT ACTTTTTTTT TCATTTTGCA CCTTGGAAAC GATGAAAGTC 000400 000401 AGCTGTTAAT GCTGGAAATG AGTAGATAAA CAACAGCAGC AGGTAAGTGA TGCCTGATTG TGCCTCAGCT CGgtgtaatc 000480 000481 gtaaagacct gggtttctgg agccggcctg tctttgaatc ctactactgc tataccttag ctacggaccc ttgagtaagt 000560 000561 tgcttttact tttttttttt tttg |
Predicted Small Protein
Name | NONHSAT044023_smProtein_113:394 |
Length | 94 |
Molecular weight | 11387.9119 |
Aromaticity | 0.10752688172 |
Instability index | 43.4021505376 |
Isoelectric point | 9.55291748047 |
Runs | 11 |
Runs residual | 0.0126443647949 |
Runs probability | 0.0499510205394 |
Amino acid sequence | MGSKRRNLSCSERHQKLVDENYCKKLHVQALKNVNSQIRNQMVQNENDNRVQRKQFLRLL QNEQFELDMEEAIQKVSFTIHCYFFFHFAPWKR |
Secondary structure | LLLLLLLLLLHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHH HHHHHHHLHHHHHHHHLEEEEEEEEEEELLLLL |
PRMN | - |
PiMo | - |