NONHSAT046867

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT046867

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1808 nt

Genomic location

chr15-:67833125..67834932

Exon number

1

Exons

67833125..67834932

Genome context

Sequence
000001 CCGGGAGGAT GCGCCCCCGG CGTGGGAAGC CGAGGAAccg gcgcgcggcg cgcggcgcgT GGCGCGTGGC GAGTCGGGGA 000080
000081 GAGACTGGTC TTGCTCGCTC AGGAGACCCT CATCGCCCAC AGAGCGCCCG CGGCGACCCG GTCACGGCCC TTCCATTTCC 000160
000161 TGACCCTGCT TAATGACAGC GAGGTGAAAA CATCTACCAA ACGAAGGGTA AAAGGCTGGA GTCCGCCAAA AGCCAATTTA 000240
000241 AGGCTTAACA TTGCAGACCG TTTGTCTTTA CAAAAGCTTC AAAGACGGGG CTGCAGCTCC CGGTTATCCC CACTTTGTCA 000320
000321 AGCCATGAAT CTGAATGTTC GTGGGGTTGT GTGCATCGAA TCAGCAAGAG CAAGGCAAGA ATTCAAGAAA TAGTTCTTTT 000400
000401 TTATCCCCCC TTCCAAGTCA CAGGTTCAGA GGATCATCAT CTTTCTCCCA CATTAGCAAA ACATATTTGC ATTTTTCAGT 000480
000481 GAAGTTCTTT ACCGCACGAG TGCCCTAAAA TAGCAAACAG TTCCCTGTTC AAAAGCAATA GTAAAGAAAT TCGCCGAAGA 000560
000561 GTTTAATTGC CTGGGGACAG CTGCAGTAGT CGCATCATCG TCTCTTATTA AACTGTTGCA GAAATATTCG GTCTAGTCCA 000640
000641 TGTATTTTCA ACTAAATAGC ACTGCTTACG CAGTTGGTGA TATGGTGATA TCACGGAAGT AGCAATAAAC CTTGGTTATC 000720
000721 tttttttttt ttttttttga gacggagtct cgctccgtcg cccaggctgg agtgcaacgg cgcgacctct actcaccaca 000800
000801 acctcagcct cccggattca agcgattctc ctgcctcagc actaccaccc ccaccagccc ccaacccctg ccgagtaact 000880
000881 gggactacag gcgtgcgcca tccgtgcccg ctcatttttg tattttcagt agagactggg tttcactatg ttggccaggc 000960
000961 tggtctcaaa ctcctgacct cgtgatccgc ccacctcagc ctcccaaagt gctgggggga ttacaggtgt gagccaccgc 001040
001041 gcccggccAA CCTTGGTTAT CTTCAAATGC CTTGTTACCT CAGATTTTAA AGTGCATAAG GTTGTAGAAC GATGGTGCCT 001120
001121 CTACAGAAGT TTCTTTACAA ATTGTAATGT GTAGGTTCGT CCTTTATTTC TTTCTTATGA AGGTGCACGA ATTGGCTTTA 001200
001201 CTTTCTGGGG TTGAATTTTG TATAAACTCG GTTGAGGAGG CTTGTCAGTT TCCCTTCTAA CAGTAAGGTG CTTGATTAAT 001280
001281 GTGAGAGAAA AAAATTAATG TTGGTCATTT TCAGTTACAA TACCAAAATT TTTTCTGCAT ACTTTACTCT GAGTTACTTT 001360
001361 TATATTTAAT TTGAAAGGCC ATTGTAGGAG ATAAATTATC ACATTTTAAG TTACTGTAAA TCAATAGCTT AGGTAGAAAT 001440
001441 TCATTTAGTC AGATCCTTCA GATATTCTAG GAATTTCCCC TTTTCACCTG CACTTCACTT CTGTGAAAAA TAAACCGTTC 001520
001521 ATCAAAAGTC CTCATGTACT TTTATTAAAA GTTCATTTCC TATTATTTTA GAAAATAGAC CACGAAACTA GAGATTTTCT 001600
001601 ATGAACCTGT GATTTGTTAA AATGTCTCTT TTATTCGAAG TACCGTGGGG AAAACCAACT CAATTTGCCA AATTTGCATA 001680
001681 CATATTCTGA AGCTTTTCTT ACACTAATGG CAAACTCATA TTTCTGTTCC AATATTTGCA GAGCCAATAT AATTACACGT 001760
001761 CAGCTCTTCA TAGCCTTTAT GTAGTAAGAA ATCTTAACTT TGATGATT
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Predicted Small Protein

Name NONHSAT046867_smProtein_8:172
Length 55
Molecular weight 5914.6125
Aromaticity 0.037037037037
Instability index 60.7333333333
Isoelectric point 12.1471557617
Runs 9
Runs residual 0.00397470641373
Runs probability 0.0385777934798
Amino acid sequence MRPRRGKPRNRRAARGAWRVASRGETGLARSGDPHRPQSARGDPVTALPFPDPA
Secondary structure LLLLLLLLLLHHHHHLLEEEELLLLLLEELLLLLLLLLLLLLLLEELLLLLLLL
PRMN -
PiMo -