NONHSAT047335

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT047335

Source

NONCODE4.0

Same with

,

Classification

sense

Length

818 nt

Genomic location

chr15-:75651458..75652402

Exon number

2

Exons

75651458..75652116,75652244..75652402

Genome context

Sequence
000001 CCTGACTGCT CACTGCAGTT ACCTCTGTGC CTGCCCCTCC CAGCCTTCCC ATCCCTGCCC TTGGCCCCTG CAGGCTCCTT 000080
000081 CTTCTGAACC AGTTCCATGA TGTGGTGACT GGAAGCTGCA TCCAGATGGT GGCAGAGGAA GCCATGTGCC ATTATGAAGA 000160
000161 CATCCGTTCC CATGGCAATA CACTGCTCAG CGCTGCAGCC GCAGCCCTGT GTGCTGGGGA GCCAGGTCCT GAGGGCCTCC 000240
000241 TCATCGTCAA CACACTGCCC TGGAAGCGGA TCGAAGTGAT GGCCCTGCCC AAACCGGGCG GGGCCCACAG CCTAGGTACG 000320
000321 AGCTGAGGGG AAGGGTTGCT ACTGCAGCAG GAAGGATGGA GGCCAGACAG ATCAGGCCTG GGATACCCCG AGGGATCTGG 000400
000401 GTGCCCCTGA CTGGAGAGTA GTAGCACATC TTCCACCAAC CCATCCCCAC CTGCGCAAGC TTCCTGAAAG GTCAGGAAGG 000480
000481 CTGCACTGAT GCCCAGGCCT CACCCCCAGC CCTGGTGACA GTGCCCAGCA TGGGCTATGC TCCTGTTCCT CCCCCCACCT 000560
000561 CACTGCAGCC CCTGCTGCCC CAGCAGCCTG TGTTCGTAGT GCAAGAGGTG AGTCCTGCAT GCCCTGGGGG GCAGGAACTG 000640
000641 TGCTGGGATA CTTTCTTACA ACTGAGGGTC CTGAGCTCCC CTGTCTGGAG CAAGTGGTGA GGCGGGGCTG GGGTTGGGGT 000720
000721 GGGAAGACTT TTGGTGTGGG AAGCCCCTAC AGACTCAGCC TCAAGGCCTC CTCCCACAAA GACTGATGGC TCCGTGACTC 000800
000801 TGGACAATGG CATCATCC
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Predicted Small Protein

Name NONHSAT047335_smProtein_125:325
Length 67
Molecular weight 6854.8443
Aromaticity 0.030303030303
Instability index 48.2454545455
Isoelectric point 5.40472412109
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0434159649846
Amino acid sequence MVAEEAMCHYEDIRSHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGA
HSLGTS
Secondary structure LLHHHHHHHHHHHHHLLHHHHHHHHHHHHHLLLLLLEEEEEELLLLEEEEEEEELLLLLL
LLLLLL
PRMN -
PiMo -