NONHSAT047335
Revision as of 22:02, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047335 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
818 nt |
Genomic location |
chr15-:75651458..75652402 |
Exon number |
2 |
Exons |
75651458..75652116,75652244..75652402 |
Genome context |
|
Sequence |
000001 CCTGACTGCT CACTGCAGTT ACCTCTGTGC CTGCCCCTCC CAGCCTTCCC ATCCCTGCCC TTGGCCCCTG CAGGCTCCTT 000080
000081 CTTCTGAACC AGTTCCATGA TGTGGTGACT GGAAGCTGCA TCCAGATGGT GGCAGAGGAA GCCATGTGCC ATTATGAAGA 000160 000161 CATCCGTTCC CATGGCAATA CACTGCTCAG CGCTGCAGCC GCAGCCCTGT GTGCTGGGGA GCCAGGTCCT GAGGGCCTCC 000240 000241 TCATCGTCAA CACACTGCCC TGGAAGCGGA TCGAAGTGAT GGCCCTGCCC AAACCGGGCG GGGCCCACAG CCTAGGTACG 000320 000321 AGCTGAGGGG AAGGGTTGCT ACTGCAGCAG GAAGGATGGA GGCCAGACAG ATCAGGCCTG GGATACCCCG AGGGATCTGG 000400 000401 GTGCCCCTGA CTGGAGAGTA GTAGCACATC TTCCACCAAC CCATCCCCAC CTGCGCAAGC TTCCTGAAAG GTCAGGAAGG 000480 000481 CTGCACTGAT GCCCAGGCCT CACCCCCAGC CCTGGTGACA GTGCCCAGCA TGGGCTATGC TCCTGTTCCT CCCCCCACCT 000560 000561 CACTGCAGCC CCTGCTGCCC CAGCAGCCTG TGTTCGTAGT GCAAGAGGTG AGTCCTGCAT GCCCTGGGGG GCAGGAACTG 000640 000641 TGCTGGGATA CTTTCTTACA ACTGAGGGTC CTGAGCTCCC CTGTCTGGAG CAAGTGGTGA GGCGGGGCTG GGGTTGGGGT 000720 000721 GGGAAGACTT TTGGTGTGGG AAGCCCCTAC AGACTCAGCC TCAAGGCCTC CTCCCACAAA GACTGATGGC TCCGTGACTC 000800 000801 TGGACAATGG CATCATCC |
Predicted Small Protein
Name | NONHSAT047335_smProtein_125:325 |
Length | 67 |
Molecular weight | 6854.8443 |
Aromaticity | 0.030303030303 |
Instability index | 48.2454545455 |
Isoelectric point | 5.40472412109 |
Runs | 9 |
Runs residual | 0.0142442387951 |
Runs probability | 0.0434159649846 |
Amino acid sequence | MVAEEAMCHYEDIRSHGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRIEVMALPKPGGA HSLGTS |
Secondary structure | LLHHHHHHHHHHHHHLLHHHHHHHHHHHHHLLLLLLEEEEEELLLLEEEEEEEELLLLLL LLLLLL |
PRMN | - |
PiMo | - |