NONHSAT048521
Revision as of 22:07, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048521 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
686 nt |
Genomic location |
chr15-:93013391..93014782 |
Exon number |
2 |
Exons |
93013391..93013779,93014486..93014782 |
Genome context |
|
Sequence |
000001 GAAATTCTCT GAGTGGGTCA AATGGGGACT GGAAAAATTC CACCCACTAG CTCAGCTAAT GGGTAAAAAT GCTGGACATT 000080
000081 TATCTGGAGC TGCAGGGGGT AAAGTGTCAT CCTTGGGAAA TTCAAAGCTG GCCTGTACCT GCTGAGAGCA CCAGGGATAT 000160 000161 GGTCACATTG CAAGCCTGTT GCCAGCACCC CAGGCAGAGT CATCAACAAT TACTTTGGAG GAGGGCCACT TCCACCTTCC 000240 000241 AGGGCATAGG TGACCCCTGT GGAAAACAAG TACCCCTGGA ACATCCTAGA AGTGGAGGTT CTTGAGTGGC AGGCTTTCAG 000320 000321 ATCATCTGGT ACTCCTTCCA GAGCTCCTGA CCAGAGATGG GGCATTTGTG AACACAAGAT ACAGCCAAGC AACCTGTCCC 000400 000401 GCTGTTGTTA TTACAGTGAG TTATATTCTT GCCCACCTAG GCCACTGGAA TGAGAATGCA GTAAAACAGC TTGCCTCAGA 000480 000481 GTGGTCTTCC CTGGAACACA CAGCTTCTGT TAAGCATTCA TGATTCTGAC GGGCCAGTCA TCCCTTCATT GACTTTGTCC 000560 000561 AGCAGCTCCA CCATTACAGT CTCATTTTAG AAAATAAAGA CACTTGGAAA CAAATTGAAA GGGCGTTTTC CTGCACCAAC 000640 000641 CCCATTTGAC TTGCCTCAGC ATGCTGAATG GAGGGCTGCA CTCCCC |
Predicted Small Protein
Name | NONHSAT048521_smProtein_68:304 |
Length | 79 |
Molecular weight | 8852.9942 |
Aromaticity | 0.0641025641026 |
Instability index | 70.3602564103 |
Isoelectric point | 6.88201904297 |
Runs | 11 |
Runs residual | 0.0073483427142 |
Runs probability | 0.0442742207449 |
Amino acid sequence | MLDIYLELQGVKCHPWEIQSWPVPAESTRDMVTLQACCQHPRQSHQQLLWRRATSTFQGI GDPCGKQVPLEHPRSGGS |
Secondary structure | LLLEEEEELLEELLLLEEELLLLLLLLHHHHHHHHHHHLLLLLHHHHHHHHHHHHLLLLL LLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |