NONHSAT048521

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT048521

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

686 nt

Genomic location

chr15-:93013391..93014782

Exon number

2

Exons

93013391..93013779,93014486..93014782

Genome context

Sequence
000001 GAAATTCTCT GAGTGGGTCA AATGGGGACT GGAAAAATTC CACCCACTAG CTCAGCTAAT GGGTAAAAAT GCTGGACATT 000080
000081 TATCTGGAGC TGCAGGGGGT AAAGTGTCAT CCTTGGGAAA TTCAAAGCTG GCCTGTACCT GCTGAGAGCA CCAGGGATAT 000160
000161 GGTCACATTG CAAGCCTGTT GCCAGCACCC CAGGCAGAGT CATCAACAAT TACTTTGGAG GAGGGCCACT TCCACCTTCC 000240
000241 AGGGCATAGG TGACCCCTGT GGAAAACAAG TACCCCTGGA ACATCCTAGA AGTGGAGGTT CTTGAGTGGC AGGCTTTCAG 000320
000321 ATCATCTGGT ACTCCTTCCA GAGCTCCTGA CCAGAGATGG GGCATTTGTG AACACAAGAT ACAGCCAAGC AACCTGTCCC 000400
000401 GCTGTTGTTA TTACAGTGAG TTATATTCTT GCCCACCTAG GCCACTGGAA TGAGAATGCA GTAAAACAGC TTGCCTCAGA 000480
000481 GTGGTCTTCC CTGGAACACA CAGCTTCTGT TAAGCATTCA TGATTCTGAC GGGCCAGTCA TCCCTTCATT GACTTTGTCC 000560
000561 AGCAGCTCCA CCATTACAGT CTCATTTTAG AAAATAAAGA CACTTGGAAA CAAATTGAAA GGGCGTTTTC CTGCACCAAC 000640
000641 CCCATTTGAC TTGCCTCAGC ATGCTGAATG GAGGGCTGCA CTCCCC
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Predicted Small Protein

Name NONHSAT048521_smProtein_68:304
Length 79
Molecular weight 8852.9942
Aromaticity 0.0641025641026
Instability index 70.3602564103
Isoelectric point 6.88201904297
Runs 11
Runs residual 0.0073483427142
Runs probability 0.0442742207449
Amino acid sequence MLDIYLELQGVKCHPWEIQSWPVPAESTRDMVTLQACCQHPRQSHQQLLWRRATSTFQGI
GDPCGKQVPLEHPRSGGS
Secondary structure LLLEEEEELLEELLLLEEELLLLLLLLHHHHHHHHHHHLLLLLHHHHHHHHHHHHLLLLL
LLLLLLLLLLLLLLLLLL
PRMN -
PiMo -