NONHSAT053385

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT053385

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1161 nt

Genomic location

chr17+:37071930..37073090

Exon number

1

Exons

37071930..37073090

Genome context

Sequence
000001 GCAGCGTCCG TCTGGTTCAC CTACTCTGAG CCAGGCCTAG AGCAAGTGAA TAAGCCCAGC AGGAATGGGG TGAGATCAGG 000080
000081 CTTCCTGAGC CCTCAGAGCT GAAGTCCCGG CTCTGTAAGT CCTGCCACTC ACTCCACCCA TGGGTGCCGC TGAGCCACCC 000160
000161 TTACCAAGCT CCTGGCAGGC TCAGCGCCTC CAGGCTGGGT GCCTGGGAAT TCAAAGTAGC TCACGTAGGA GCAGAACAGA 000240
000241 TACTTAGAGA GATAAAATCG CCTGAGATAA TGGCTGGCTG GAGTCTGATG CTCTGGGCAC ACAAACAAAG GGATGTTAGG 000320
000321 ACTGCCCAGG GCACTGTGGG CGCAAGAGTT AGTCTGAAGT ATAAGGTTCC AGGCAGCCCA GCCAGTCCCT CCCTCCTCAA 000400
000401 TGGGTCTGTC CTGGATGTGT AGGGTCCATC TCTGAATATA AAGCCACCTC TCTGCCCTCT GGGGGCTTAC ATTCCAGTCA 000480
000481 GGGGGACAAA CAAGAAAACA ATAAGAAAAT AGGTGTATAA CATAAGGTCA GCGGTGACAC GCTGTGAAGA GAAAGACAGC 000560
000561 AGGGTGAGGG ATGGATAGAA AGCAGCTGGA TTAAGACATT TGGCCGGGGG TGGTGGCTCA CGCCTGTAAT CCCAGCACTT 000640
000641 TGGGAGGCCA AGGCGGGCAG GTCACTTGAG GTCAGGAGTT CGAGATCAGC CTGGCCAACA TGGTGAAACC CCCTGTCTAC 000720
000721 CAAAAATACA AAAATTAGCC AGGTGTGGTG GTGTATGCCT GTAACCTGTA ATCCCAGCTA CTCGGGAGGC TGAGGCAGTA 000800
000801 GAATTGCTTG AACCCGAGAG GCAGAGGTTG CAGTGAGCCA AGATTGCACT ATTGCACTCC AGCCTGGGTG ACAGAGCAAT 000880
000881 ATCTCCAAAG AAAAAAGACA TTTGGCCGGG TGCGATGGCT CACACCTGTA ATCCCAGCAC TTTGGGAGGC CAAAGTGGGC 000960
000961 AGATCACCTG AGGTCAGGAG TTCGAAACCA GCCTGGCCAA CATGGTGAAA CCCTGTCTCT ACTAAAAATA TAAAATTAGC 001040
001041 TCGGCATGGT GGTGCATGTT CATAATCCCA GCTACTCGGG AGGCTGAGGC AGGAGAATTG CTTGAACCTG GGAGGTGGAG 001120
001121 GTTGCAGTGA GCCGAGATCA CGCCATTTGC ACTCCAGCCT G
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Predicted Small Protein

Name NONHSAT053385_smProtein_269:421
Length 51
Molecular weight 5337.1442
Aromaticity 0.06
Instability index 41.868
Isoelectric point 10.4326782227
Runs 9
Runs residual 0.0153216374269
Runs probability 0.0252016722605
Amino acid sequence MAGWSLMLWAHKQRDVRTAQGTVGARVSLKYKVPGSPASPSLLNGSVLDV
Secondary structure LLHHHHHHHHHHLLLHHHHLLEEEEEEEEEEELLLLLLLLLLLLLLEEEL
PRMN -
PiMo -