NONHSAT055266
Revision as of 22:24, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055266 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
849 nt |
Genomic location |
chr17+:62111002..62111850 |
Exon number |
1 |
Exons |
62111002..62111850 |
Genome context |
|
Sequence |
000001 atctaatcta tggtgatgga agccagaggg gtggttaccc cctggggaat ggagaggtgt gtttggactg aaaggggcaa 000080
000081 aagaggacct tctggggagg tggaaatgct ccatgtctag atctgggagg tggttatact ggtttttata atgtatgtaa 000160 000161 aaatcaccaa gttgcacatt taagatctat gcattttact atatgtaaat tatatcttaa tttttctttc attttttttt 000240 000241 ttggagacag agtctggctt tgttgcccag gctggagtat agtggtgcaa tctcaattta cctaggctca agtgatcctc 000320 000321 ccgcctcagc cttctgagta gctgggacta caggtgtgtg taccatgcct ggctaatttc tgtttttttt gtttttgttt 000400 000401 ttgtttttgg tagaggtggg tttttttcat gttgtccaga ctggtcttga actcctgggc tcaagttatc ctcccggccc 000480 000481 agcctcctaa TCTTTCAttt ttttttttaa gagacagggt ttcactatgt tgcccaggct ggccttgaac ttctgggctc 000560 000561 aagtgaacct cctacctcat cctctcaagt acctgggact acaggtgtgt gccactgtac tcagcTTTAT AGCTTAACTT 000640 000641 TTAAAAAGAA ATATTGCTAA AGAGAAGAAA AAAAAGCAAG ATTCAGACTA GTGTGCATAG TATGTGCATA AAAAAGTGGG 000720 000721 AGAAAGAATA TGAAGTCATG TTTGCTTAAA CAACGACTGT AAGGATACCC TAGAATCCAA AGGAGACAGT CTACTTCGGT 000800 000801 GGTGGATTTA CCAGAAGGGG CCAGGGAGGG GAGAGGGAGG CATTTCACC |
Predicted Small Protein
Name | NONHSAT055266_smProtein_428:547 |
Length | 40 |
Molecular weight | 4473.2925 |
Aromaticity | 0.128205128205 |
Instability index | 44.6948717949 |
Isoelectric point | 9.00592041016 |
Runs | 8 |
Runs residual | 0.0363876319759 |
Runs probability | 0.036996555379 |
Amino acid sequence | MLSRLVLNSWAQVILPAQPPNLSFFFLRDRVSLCCPGWP |
Secondary structure | LLLHHHHHHHHHHEELLLLLLLLEEEEELLEEELLLLLL |
PRMN | - |
PiMo | - |