NONHSAT055911

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT055911

Source

NONCODE4.0

Same with

,

Classification

sense

Length

485 nt

Genomic location

chr17+:73570033..73570749

Exon number

2

Exons

73570033..73570061,73570294..73570749

Genome context

Sequence
000001 GAACTCAGGG ACTCAGAGTG ATGGCGAGGA GAAGCAGCCC GGCCTGGTGA TGGAGCGCGC TCTGCTCAGT GATGAGAGTG 000080
000081 AGTTGGGTGG GAGAGGGTGG GGCTGGCAGG AGGGGTGGGG AAGGGGGGTC AGGGTCAAGG GAGGCTGGGC AGGCCACTGC 000160
000161 CCTGAGGCGG GGTACAGATC CATGGGCACC CACGGAGAAA GGGGGTGGAA GGGCTGTGGC TAGCCGCCCC AAGGGCCTCA 000240
000241 GTGGGCCTCT GTTCCCACCC GGCCTGCAGG AGTCCTGAAG GAAATCCAGA GCACACTGGA GGGAGACCGC GGGTGAGGCA 000320
000321 CCGCCCAGGC CAGCTGGGGT GGGCCCGAGG CTCTGCCAGA GGGCTCAGGG GAGCGCTGAG AGTGGAGGTC CCTGAGGCCA 000400
000401 TGACTCCCCT GTCTTTGCCT GTGCAGGAGC GGCAACTGGC GTTCACATCG AGCCGCCGTG GGGTGCAGCC TCAGCAATGG 000480
000481 CGGAG
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Predicted Small Protein

Name NONHSAT055911_smProtein_71:277
Length 69
Molecular weight 6817.4584
Aromaticity 0.0441176470588
Instability index 52.9426470588
Isoelectric point 11.2098999023
Runs 8
Runs residual 0.022853736089
Runs probability 0.0394364953189
Amino acid sequence MRVSWVGEGGAGRRGGEGGSGSREAGQATALRRGTDPWAPTEKGGGRAVASRPKGLSGPL
FPPGLQES
Secondary structure LEEEEEELLLLLLLLLLLLLLLHHHHHHEEEELLLLLLLLLLLLLLEEEEELLLLLLLLL
LLLLLLLL
PRMN -
PiMo -