NONHSAT055921
Revision as of 22:27, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055921 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
564 nt |
Genomic location |
chr17+:73616974..73618138 |
Exon number |
3 |
Exons |
73616974..73617256,73617425..73617650,73618084..73618138 |
Genome context |
|
Sequence |
000001 ttaataaaCA GCTCTTCACT TTCCTGGCTT CTGGTCTTGC TCCTTTGGTG TCTGGCTGGG GAGGGATGGG GCTGGGGCAG 000080
000081 GACCCCTGGG ACAGGGCACT GGACACTCAG GTGGCACCAG GTTTCTTGTG ATCCCAGCGC CCTGCCCACC CTTGGAGCCA 000160 000161 GGCACACAGT GACGACTCGG AGGCCACCAG CCTGTCCTCT GTGGCCTATG CCTTTCTGCC CGACTCCCAC AGCTACACCA 000240 000241 TGCAGGAATT CGCCCGGCGT TACTTCCGGA GGTCCCAGGC CTTGCTGGGC CAGACTGATG GAGGTGCCGC AGGAAAGGAC 000320 000321 ACGGACAGCC TGGTGCAGTA CACCAAGGTG GGAGAGAGGC AGGGAGGGGT CTGGCCCGTA GATCTGCCCT CTGACCCCCA 000400 000401 CGGCCCCCCA GACCCATGGC CTCCTCTCTT TGGCCACAGG CTCCCATCCA GGAGTCGCTC CTCAGCCTCA GTGATGATGT 000480 000481 GAGCAAGCTG GCTGTAGCCA GCTTCCTGGC CCTGATGCGG TTTATGGGTG ACCAGTCCAA GCCCCGGGGC AAGGATGAGA 000560 000561 TGGA |
Predicted Small Protein
Name | NONHSAT055921_smProtein_239:481 |
Length | 81 |
Molecular weight | 8838.8168 |
Aromaticity | 0.0875 |
Instability index | 61.67 |
Isoelectric point | 9.50994873047 |
Runs | 9 |
Runs residual | 0.0263157894737 |
Runs probability | 0.0450254175745 |
Amino acid sequence | MQEFARRYFRRSQALLGQTDGGAAGKDTDSLVQYTKVGERQGGVWPVDLPSDPHGPPDPW PPLFGHRLPSRSRSSASVMM |
Secondary structure | LHHHHHHHHHHHHHHHLLLLLLLLLLLLLLEEEEEEELLLLLLEEEEELLLLLLLLLLLL LLLLLLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |