NONHSAT056026
Revision as of 22:27, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056026 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
504 nt |
Genomic location |
chr17+:74536618..74549656 |
Exon number |
2 |
Exons |
74536618..74536655,74549191..74549656 |
Genome context |
|
Sequence |
000001 GGCAGCAGCT TGGATGCGGA CCCTCAGTCC TCAGGCAGtc cttcagctcc tacttaatgg aagcctcgca gatgcaagat 000080
000081 ggctccagca ggcccagcat cacttcttct cagtgtccca aagccagaag agaggctgtt gtttttaaaa gcaggaaaac 000160 000161 tttcctaaac ttggccagaa ttgcatcaca gaccctttcc taaaacaatt tccagcaaag ggaatagact taccatgtct 000240 000241 ggtacagatg aatcaaggtt tgcccctggg ggctggggag gggcttgtcc cgctgaagca gactcttgcc cagcagctga 000320 000321 acgaagccta ggttcaccag acggaggaag agactggcca ctaacagtgc ctgacacaCA GATGTGCTTC CTGTGATATC 000400 000401 GCTGCTGCCA CCGTTCCAAA TGTAAGCAGT TGGCTGTCTG GGATACTACC TACCTTCTTT TGTGTTCTTA TTAATAAAAT 000480 000481 TAAAGATTGC TTTCTGGGTA GAGA |
Predicted Small Protein
Name | NONHSAT056026_smProtein_56:202 |
Length | 49 |
Molecular weight | 5301.0066 |
Aromaticity | 0.0416666666667 |
Instability index | 62.1604166667 |
Isoelectric point | 10.8866577148 |
Runs | 6 |
Runs residual | 0.0405701754386 |
Runs probability | 0.0414237767179 |
Amino acid sequence | MEASQMQDGSSRPSITSSQCPKARREAVVFKSRKTFLNLARIASQTLS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHHHHEEELHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |