NONHSAT058474
Revision as of 22:34, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058474 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
830 nt |
Genomic location |
chr18-:14074911..14075740 |
Exon number |
1 |
Exons |
14074911..14075740 |
Genome context |
|
Sequence |
000001 AATGTCCTCT AGGGATGTGG CAATAGGAAT AATCTTATCT CAGACCATAA TTGGGTTCCT GATGAAAATA TTTTTTCTTT 000080
000081 AGCATTGTAT TTCTCTTTAT TTCACCAAAT GCACATTAAG GTCTACAGAT CTGATTCTCA AACACCTGGC TGTAGCCACC 000160 000161 TCCTTTGTGA TACTTTATAA AGGAGCCCCA CAGAGAATGC CTGCTTTTGG GTTGAAACAT TTTCTCAATC ATAATTAGGT 000240 000241 ACAAACTTGT TTTCTATGTT CACAAAGTGG GCAGGGCTGT GTGCATTGGC ACCACTTGCC TTTTGAATAT CTTCTAGGCC 000320 000321 ATCACAGTCA GCCCCATGTA CTCCTGCTGG GCAGACCTGA AACTACAAGC TCCCAAATAG AATGGGTGCT CCAACATCCT 000400 000401 CTGCTGGATT GTGATATGCT GGTAACCGCA CGTGACTGGC AAGTGGAATG GCGAAAACAA CACAAAGAAG GATTTGGTTA 000480 000481 CTGTTCTGCA GTAGTTAATA ACtgatatgg tttggctatg tccccactca aacctcatct tgaattccta tgtgttgtgg 000560 000561 gaggaacttg gtgggaggtg attgaattat gggggcaggt cttttctgta ttgttctcgg gatggtgaat gagtctcatg 000640 000641 agacctgatg gttttaaaaa caggagtttc cctgtacaag ctctctcttt gcctgctccc atccatgtaa gacctgactt 000720 000721 gctcctgctt accttccgcc atgattgtga ggcctcccca accatgtgga actgaaagtt tgttaaacct ttttttcttc 000800 000801 ccagtcttgg gtatgtcttt atcagcaatg |
Predicted Small Protein
Name | NONHSAT058474_smProtein_506:580 |
Length | 25 |
Molecular weight | 2830.2854 |
Aromaticity | 0.125 |
Instability index | 59.3666666667 |
Isoelectric point | 5.38043212891 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0332803391628 |
Amino acid sequence | MVWLCPHSNLILNSYVLWEELGGR |
Secondary structure | LEEELLLLLHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |