NONHSAT058485
Revision as of 22:34, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058485 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
661 nt |
Genomic location |
chr18-:14121792..14132428 |
Exon number |
3 |
Exons |
14121792..14122170,14124349..14124475,14132274..14132428 |
Genome context |
|
Sequence |
000001 ACTTCAGCCA GAGCGCGGGG TTAGGGCTTC ATTGCCTTGT GTCCTCTGCT CCGGGAGACT TCGGTGATTC TGCCACTCAC 000080
000081 TCCGTCGCTC TGTGACCTGC TGGCATTGAA TGATTTATAG CTAAGACTCC AGGACACCCC TGAAGCCGAG AAATGGAACT 000160 000161 CTTAACATTC AGGGATGTGG CCATAGAATT CTCTCCAGAA GAGTGGAAAT GCCTAGACCC TGCCCAACAG AATTTATATA 000240 000241 GAGATGTGAT GTTGGAGAAC TACAGAAACC TCGTCTCCCT GGATTTTCAA ATTATAGTTC AAAGAatgag tgtccaacct 000320 000321 tttggcttcc ccgggtcaca ttggaagaag aaacattgtc ttgggccaca cataaaatac acgaacacta atgatagctg 000400 000401 atgtgctaaa aagaaaaaag gttcatgcag ttttcatgat attcgtcacc acagataagc aaaaagtcct ctcattcaaa 000480 000481 gagctggttg gacaccactg ATTAAAAGTA TCTACTCACC TTCTAGATTT TTTAAATGCC CTGTGTCATT AATGAGCTTA 000560 000561 GAACATTGCT AAGCAAATAT TAAGCCATCT ATTATCTTAT TTTTTAATAA CTATTATCTT ATAATTTTGT CTTATTTAGT 000640 000641 AGGGAGCCTG CTGGGACTGT G |
Predicted Small Protein
Name | NONHSAT058485_smProtein_152:400 |
Length | 83 |
Molecular weight | 9716.0158 |
Aromaticity | 0.121951219512 |
Instability index | 44.1719512195 |
Isoelectric point | 6.25164794922 |
Runs | 13 |
Runs residual | 0.0226348854398 |
Runs probability | 0.0337124454772 |
Amino acid sequence | MELLTFRDVAIEFSPEEWKCLDPAQQNLYRDVMLENYRNLVSLDFQIIVQRMSVQPFGFP GSHWKKKHCLGPHIKYTNTNDS |
Secondary structure | LEEEEELEEEEEELLHHHLLLLHHHHHHHHHHHHHHHHLLLLLLEEEEEEEEEEELLLLL LLLLLLLLLLLLLLEELLLLLL |
PRMN | - |
PiMo | - |