NONHSAT059802

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT059802

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

813 nt

Genomic location

chr18+:69477795..69504076

Exon number

3

Exons

69477795..69478051,69500338..69500807,69503991..69504076

Genome context

Sequence
000001 atgtgacatc ttgagttaag aactgctttg ttcttctctc ctctagaagc caaatgtcct ccacagcttt gcccagtggg 000080
000081 acacatggct cctgacatac gtaacccagg atgggatgcc ttgttggagt ctctcagata tggagcaaaa tgggccatgt 000160
000161 gcagtcaaga cgccatctac cctgggcagc ttgcctaagc ctcgagggac ctgccaatga tggatctgag acctcttctg 000240
000241 tccctggctg cctatctGTC TGGTCCTCAT CAAGAACCCA GTGTTCCCAC CCGAGATGGA GACGTGAATA ATCTTCCTAA 000320
000321 GCCTAATCCT GCCAGAAGCG TGAAGCAAGG GGGAATTTGG AAGGCGGAAC AGGAAAGAGT GGAAGTTTAG TTTACCGCTC 000400
000401 TCCAAAATAG AAGCTCTTTT CCCTGAGATA GAAGCAAGAT GCTGCAAGAG AAAGGGTCAG AGAAACTGGA TTCAATTTTA 000480
000481 ATTTAGCCTG GATGCTGAAA TAACCCTATC TCTACTAAAT GCCAAATCTT CACATTCTCT TGGCCAACAA AGTGACTCCA 000560
000561 GTGTTGCCAC GGCAACCGTC TGTGGGTAGG CATGAAGGAC AGCACCTCAC CTTAGCTGCA GCAGCCCACA CACACAGCTC 000640
000641 ACTTTCTGCC TGGACTCCTC TGCCTGCAGC TGGTATCGGG CCTGTTGGAA TTTGCTCATC CATTTCATCG TGGGCCAGTG 000720
000721 TGAAATGgca cagtggagtt tctttgaggc tacatggtga gagaagatgt caccgctctg acTGACATAC ATAATGAtgt 000800
000801 gtgtgtgtgt gtg
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Predicted Small Protein

Name NONHSAT059802_smProtein_518:784
Length 89
Molecular weight 9409.6812
Aromaticity 0.0340909090909
Instability index 56.8568181818
Isoelectric point 10.7630004883
Runs 13
Runs residual 0.0163636363636
Runs probability 0.0401668636964
Amino acid sequence MPNLHILLANKVTPVLPRQPSVGRHEGQHLTLAAAAHTHSSLSAWTPLPAAGIGPVGICS
SISSWASVKWHSGVSLRLHGERRCHRSD
Secondary structure LLLLEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLEEEEE
ELLLLLEEEELLLEEEEELLEEEEELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHH
HHHHHHHLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTT
TTTTTTTiiiiiiiiiiiiiiiiiiiii