NONHSAT060074

From LncRNAWiki
Revision as of 22:40, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT060074

Source

NONCODE4.0

Same with

,

Classification

sense

Length

566 nt

Genomic location

chr18+:77794389..77797504

Exon number

3

Exons

77794389..77794653,77796668..77796710,77797247..77797504

Genome context

Sequence
000001 CCGCTCTGCG CCGTCGCCCC GCCCACACGC CGCCACCCTC GCGTCAGTTG TCGCTCCGCG CCTGCGCCCG TTGTCTCCCT 000080
000081 GCTCGCTCCG GGTCCCGGCG CCGCGCCATG TGGGCTGCGG CGGGCGGGCT GTGGCGCTCC CGCGCGGGTC TCCGGGCCCT 000160
000161 GTTCCGTAGC CGCGATGCTG CGCTATTTCC AGGCTGCGAG CGGGGACTTC ACTGCTCTGC TGTCTCCTGC AAGAACTGGC 000240
000241 TCAAGAAATT TGCCTCGAAA ACCAAAAAAA AGGTTTGGTA TGAAAGTCCT TCCTTGGGTT CTCACTCGCC CTCCCCCAGC 000320
000321 CCCTGCTGTG TGACTTGGTG AGTTTGGAGT TGTAACGCTG CCCTTGGGGT GTGCTCTTCT TCCTGATGGA GACTTACAAA 000400
000401 CCATCCAAGT TGGAATTCCT CATGAGGAGC ACCTCAAAGA AAACCAGGAA GGAAGACCAT GCGCGCCTGA GGGCCCTGAA 000480
000481 CGGCCTCCTC TATAAGGCAC TGACAGACCT GCTGTGTACC CCTGAAGTGA GTCAGGAGCT GTATGACCTT AACGTGGAGC 000560
000561 TCTCCA
[back to top]

Predicted Small Protein

Name NONHSAT060074_smProtein_107:340
Length 78
Molecular weight 8513.826
Aromaticity 0.116883116883
Instability index 62.0350649351
Isoelectric point 10.0703735352
Runs 14
Runs residual 0.0457368718238
Runs probability 0.0254435107377
Amino acid sequence MWAAAGGLWRSRAGLRALFRSRDAALFPGCERGLHCSAVSCKNWLKKFASKTKKKVWYES
PSLGSHSPSPSPCCVTW
Secondary structure LHHHLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLEELLEEHHHHHHHHHHHLLLEEEEEL
LLLLLLLLLLLLLEELL
PRMN -
PiMo -