NONHSAT060074
Revision as of 22:40, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT060074 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
566 nt |
Genomic location |
chr18+:77794389..77797504 |
Exon number |
3 |
Exons |
77794389..77794653,77796668..77796710,77797247..77797504 |
Genome context |
|
Sequence |
000001 CCGCTCTGCG CCGTCGCCCC GCCCACACGC CGCCACCCTC GCGTCAGTTG TCGCTCCGCG CCTGCGCCCG TTGTCTCCCT 000080
000081 GCTCGCTCCG GGTCCCGGCG CCGCGCCATG TGGGCTGCGG CGGGCGGGCT GTGGCGCTCC CGCGCGGGTC TCCGGGCCCT 000160 000161 GTTCCGTAGC CGCGATGCTG CGCTATTTCC AGGCTGCGAG CGGGGACTTC ACTGCTCTGC TGTCTCCTGC AAGAACTGGC 000240 000241 TCAAGAAATT TGCCTCGAAA ACCAAAAAAA AGGTTTGGTA TGAAAGTCCT TCCTTGGGTT CTCACTCGCC CTCCCCCAGC 000320 000321 CCCTGCTGTG TGACTTGGTG AGTTTGGAGT TGTAACGCTG CCCTTGGGGT GTGCTCTTCT TCCTGATGGA GACTTACAAA 000400 000401 CCATCCAAGT TGGAATTCCT CATGAGGAGC ACCTCAAAGA AAACCAGGAA GGAAGACCAT GCGCGCCTGA GGGCCCTGAA 000480 000481 CGGCCTCCTC TATAAGGCAC TGACAGACCT GCTGTGTACC CCTGAAGTGA GTCAGGAGCT GTATGACCTT AACGTGGAGC 000560 000561 TCTCCA |
Predicted Small Protein
Name | NONHSAT060074_smProtein_107:340 |
Length | 78 |
Molecular weight | 8513.826 |
Aromaticity | 0.116883116883 |
Instability index | 62.0350649351 |
Isoelectric point | 10.0703735352 |
Runs | 14 |
Runs residual | 0.0457368718238 |
Runs probability | 0.0254435107377 |
Amino acid sequence | MWAAAGGLWRSRAGLRALFRSRDAALFPGCERGLHCSAVSCKNWLKKFASKTKKKVWYES PSLGSHSPSPSPCCVTW |
Secondary structure | LHHHLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLEELLEEHHHHHHHHHHHLLLEEEEEL LLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |