NONHSAT060198
Revision as of 22:41, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT060198 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
705 nt |
Genomic location |
chr19-:901491..913151 |
Exon number |
2 |
Exons |
901491..902130,913087..913151 |
Genome context |
|
Sequence |
000001 GCGCTGGAGA ACCCCGAGTg cggcccggag gcggcggagg gcaccccggg cgggcggcgg ctgctGCCCC TTCCCAGCTG 000080
000081 CCTGCCTGCC CTAGCCAGCT CCCAGGTGAA GAGACTCTCG GCTTCCAGGC GGAAACAGCA CTTCATCAAC CAGGCAGTGC 000160 000161 GGAACTCAGA CCTCGTGCCC AAGGCCAAGG GGCGGAAGAG CCTCCAGCGC CTGGAGAACA GTGAGCAGGG GTCGGGAGGC 000240 000241 GCCTCCTGGG GGCTCCTGGG CCTTGTAGAA TGGCATGCAT ATTGGTGTTA TCTGTTACCC CTCCCATGAG CTGTGCCTGG 000320 000321 GTGGGGCTGG GGACCCAAAG AGGTGTCAGC TGTAGGCCGG GGGACCATAT AAATAGAGCC AGACACAGGC GCCCCCTGGA 000400 000401 CTCTTGGATC AGGGCTGGGT GGGAGGGCGC CCCGGGCATT GGAGCTGGGG CTTTAAAGGA TATATAGGAG TTCGACAATC 000480 000481 CAGAACCTGG GGTCTAGGTG GTCTCTGTAC CTTCTGGGGA AGACAGTTGG AGCATGGAGG TGCGGAGGTT GAGATGATAA 000560 000561 AAAAGGAGGA AGGCTAGTTC TTGGGTCCCC ATGGTGCCTG GGGGTCCCCA AATGCCACCC CGGCCCAGAG AGCATCTGTT 000640 000641 TCCACCTAGC CCAGTACCTC CTGACCCTGC TGGAGACAGA CGGGGGCCTG CCTGGCCTGG AGGAT |
Predicted Small Protein
Name | NONHSAT060198_smProtein_269:466 |
Length | 66 |
Molecular weight | 6936.0245 |
Aromaticity | 0.0461538461538 |
Instability index | 58.1261538462 |
Isoelectric point | 9.78753662109 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0491373726668 |
Amino acid sequence | MACILVLSVTPPMSCAWVGLGTQRGVSCRPGDHINRARHRRPLDSWIRAGWEGAPGIGAG ALKDI |
Secondary structure | LEEEEEEELLLLLLEEEELLLLLLEEELLLLLLLLLLLLLLLLHHHHHLLLLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |