NONHSAT060805
Revision as of 22:44, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT060805 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1063 nt |
Genomic location |
chr19-:7005023..7006085 |
Exon number |
1 |
Exons |
7005023..7006085 |
Genome context |
|
Sequence |
000001 TTCTGCCTCC GAGGAGTCCC TTACTGATGA TCATAGGCTC CTCAAGGTCA TCAGCCAGGG CAGCTTTGCA GAAGTCAAGG 000080
000081 CAGCTGGCCC AGCACATTCT CACTGGGACC AAGATGGCTG TGGAGGTCAC CCCAACAGGG CAGCAGGGCT CCTGCAGCCC 000160 000161 CCAGGGTCTG TACTGCAGGG ACCATATGAT GAAGGCCCTT AATCACCCGA AGATCATCAG ACCCACGTGG CTGGCACCGA 000240 000241 GAACAGGCTG TTCCTAGTCA TGGATTAAGC CAGCTCGGGA GAGCTATCCG ACTTCACCCT CGAATTCTTC TTGAAGGGGG 000320 000321 AAGAGGCCTG AGGCAAGTTC CAGCAAATAG GATATTCCAT GCAGTGAGGC TTCCAGAAGG AAATTATCCA CAGGGATCTG 000400 000401 AAGTCAGAGA ACTTCCCTGA GGAGGCTCAG CACGACATGG AAACAACAGA CGCTGGCTTT GATACCAGAT TCACCGTAGG 000480 000481 CTGAAAGCTG ATCCCCTTCG GTGGGAGCTC CTCTTATACA GCCTCAGAAC TGTTCCCCGG GACAAAAGTA CGATGTACCC 000560 000561 TGGTGGGCGT GTGGAGCCTG GGAGCCACTG TCTACACCAT GGTGGCCGAG GACTGCCATC TGTTGGGCAG ACTTTTGTGG 000640 000641 GGCTGAGGAC GACACTAATA CTGTGTGAAT GGTGACAGGC GATCCCATTC CTTGTTTCCA TAGAACGAGA ATGCCTCATA 000720 000721 AACACAATTC TGGCCGTTGA CTCCAGGGAG AGGCCCTCAC TAGCCCTCAT CATGGGGCGC CTATGGATTA ACATGGGCCA 000800 000801 GGAGGAGACG CTAACTAAGG CCATACTGGG AGCTGCTCCC CGATCACCCG GAGTCTGGAA AGCGCTCCTG GTGTCCCCGG 000880 000881 GAGATGAGGC AGACCATGTC CCATCGTTGT TGAAAAAATA TGTGATGATA CCATGGCCGG CTATCAGATC CTGGGCTGCA 000960 000961 GGAAACCCGA GGTGTGGGGC GCCATCATCA CAGTGAAGCT CCTGCCTTCA GCAGATCCTA CTACTTGCCG CCATTCTCCC 001040 001041 CCATCACATG AAAAAAACTC CTC |
Predicted Small Protein
Name | NONHSAT060805_smProtein_26:256 |
Length | 77 |
Molecular weight | 8261.5781 |
Aromaticity | 0.0263157894737 |
Instability index | 58.2407894737 |
Isoelectric point | 10.5409545898 |
Runs | 12 |
Runs residual | 0.0164851784634 |
Runs probability | 0.0420199611377 |
Amino acid sequence | MIIGSSRSSARAALQKSRQLAQHILTGTKMAVEVTPTGQQGSCSPQGLYCRDHMMKALNH PKIIRPTWLAPRTGCS |
Secondary structure | LEELLLLHHHHHHHHHHHHHHHHHHHLLLEEEEELLLLLLLLLLLLLLEEHHHHHHHLLL LLEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |