NONHSAT061174
Revision as of 22:46, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT061174 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
588 nt |
Genomic location |
chr19+:11670189..11715093 |
Exon number |
5 |
Exons |
11670189..11670431,11674876..11674999,11675260..11675307,11686065..11686168,11715025..11715093 |
Genome context |
|
Sequence |
000001 GGAGACGCAG TGCGCCTGCG CAAGAGCCGG TGCGTATTTG CCTGTACCTA CGCGCGATGC CAGTACTTCT GGTCAGTTTC 000080
000081 CAGGAGCGGC AAGTGAGGAA TATGAAATAA CCTTATGGCT GAATCAGGGT GAAGGGGAAG CTTGTAAGCA TGGAAGACGC 000160 000161 TCTACTCAAA CTAAaaagtt caagttctga tccagcagat gaagagggag gcctgagagg ctgctgttct aactcgctcc 000240 000241 cagagacggg gccttactct gctgcctagg ctggagtaca gtggcacaat catagctgat tgcagcctca aactcctggg 000320 000321 ctcaagcgaa actcccacgt cagcctcctg agtacctggg actacaggtt caagtgattc ttctgcctca gcctcccaag 000400 000401 tagctggaat tacagGTACT GAGGATGGAG GACAAGGGGT CAGTGGAGAC CCAGCTTTGA GCAgagccct gcctaaggtc 000480 000481 cagggctcga tctggcccta accacagagt caccttgagg acaccaagaa cttgaaaaga taattcacca agtggaagaa 000560 000561 cgacttgcaa atcctgtgtc tggtgggg |
Predicted Small Protein
Name | NONHSAT061174_smProtein_149:268 |
Length | 40 |
Molecular weight | 3987.3168 |
Aromaticity | 0.025641025641 |
Instability index | 47.2307692308 |
Isoelectric point | 4.19635009766 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0374618315795 |
Amino acid sequence | MEDALLKLKSSSSDPADEEGGLRGCCSNSLPETGPYSAA |
Secondary structure | LHHHHHHHHLLLLLLHHHLLLLLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |