NONHSAT061179
Revision as of 22:46, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT061179 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
638 nt |
Genomic location |
chr19+:11670276..11686374 |
Exon number |
4 |
Exons |
11670276..11670431,11674876..11674999,11675260..11675307,11686065..11686374 |
Genome context |
|
Sequence |
000001 GGCAAGTGAG GAATATGAAA TAACCTTATG GCTGAATCAG GGTGAAGGGG AAGCTTGTAA GCATGGAAGA CGCTCTACTC 000080
000081 AAACTAAaaa gttcaagttc tgatccagca gatgaagagg gaggcctgag aggctgctgt tctaactcgc tcccagagac 000160 000161 ggggccttac tctgctgcct aggctggagt acagtggcac aatcatagct gattgcagcc tcaaactcct gggctcaagc 000240 000241 gaaactccca cgtcagcctc ctgagtacct gggactacag gttcaagtga ttcttctgcc tcagcctccc aagtagctgg 000320 000321 aattacagGT ACTGAGGATG GAGGACAAGG GGTCAGTGGA GACCCAGCTT TGAGCAgagc cctgcctaag gtccagggct 000400 000401 cgatctggcc ctaaccacag agtcaccttg aggtatgtaa cccctcctgg cttcaatttc ctgactttta ggagtgtatt 000480 000481 aatcctattt cataggTAGA GCACTTAGTA AGAAATTGGT ggccaggtgt ggtggctcat gcctgtaatc ccagcacttt 000560 000561 gggaggctga gggggtggat tgcttgagcc caggaatttg agaccagcct gggcaacata gtgagacctt gcctctac |
Predicted Small Protein
Name | NONHSAT061179_smProtein_62:181 |
Length | 40 |
Molecular weight | 3987.3168 |
Aromaticity | 0.025641025641 |
Instability index | 47.2307692308 |
Isoelectric point | 4.19635009766 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0374618315795 |
Amino acid sequence | MEDALLKLKSSSSDPADEEGGLRGCCSNSLPETGPYSAA |
Secondary structure | LHHHHHHHHLLLLLLHHHLLLLLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |