NONHSAT061179

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT061179

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

638 nt

Genomic location

chr19+:11670276..11686374

Exon number

4

Exons

11670276..11670431,11674876..11674999,11675260..11675307,11686065..11686374

Genome context

Sequence
000001 GGCAAGTGAG GAATATGAAA TAACCTTATG GCTGAATCAG GGTGAAGGGG AAGCTTGTAA GCATGGAAGA CGCTCTACTC 000080
000081 AAACTAAaaa gttcaagttc tgatccagca gatgaagagg gaggcctgag aggctgctgt tctaactcgc tcccagagac 000160
000161 ggggccttac tctgctgcct aggctggagt acagtggcac aatcatagct gattgcagcc tcaaactcct gggctcaagc 000240
000241 gaaactccca cgtcagcctc ctgagtacct gggactacag gttcaagtga ttcttctgcc tcagcctccc aagtagctgg 000320
000321 aattacagGT ACTGAGGATG GAGGACAAGG GGTCAGTGGA GACCCAGCTT TGAGCAgagc cctgcctaag gtccagggct 000400
000401 cgatctggcc ctaaccacag agtcaccttg aggtatgtaa cccctcctgg cttcaatttc ctgactttta ggagtgtatt 000480
000481 aatcctattt cataggTAGA GCACTTAGTA AGAAATTGGT ggccaggtgt ggtggctcat gcctgtaatc ccagcacttt 000560
000561 gggaggctga gggggtggat tgcttgagcc caggaatttg agaccagcct gggcaacata gtgagacctt gcctctac
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Predicted Small Protein

Name NONHSAT061179_smProtein_62:181
Length 40
Molecular weight 3987.3168
Aromaticity 0.025641025641
Instability index 47.2307692308
Isoelectric point 4.19635009766
Runs 7
Runs residual 0.0107466063348
Runs probability 0.0374618315795
Amino acid sequence MEDALLKLKSSSSDPADEEGGLRGCCSNSLPETGPYSAA
Secondary structure LHHHHHHHHLLLLLLHHHLLLLLEELLLLLLLLLLLLLL
PRMN -
PiMo -