NONHSAT061228

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT061228

Source

NONCODE4.0

Same with

,

Classification

sense

Length

545 nt

Genomic location

chr19-:12247721..12251170

Exon number

2

Exons

12247721..12248089,12250995..12251170

Genome context

Sequence
000001 ATTCCAGCTT CTACTTTTGT TGCTATGCAG GTTGTTGTCG GGATACCAGA TTTCCTACTC CGAGAGGCCC CGGGTCCCTC 000080
000081 TGCCACAACT TCTGTCGCTC TGCCGCCTGC ACCGTGACCC GCACTATTCA CGGGAGCCCT AGAGAGGACA CCGGGACACC 000160
000161 CAGAAGCCGG GAAATGgctg gagtgaagtg gcgctctctc agctcactgc aaccgccgct tcccgagttc aagcgattct 000240
000241 cctgcctcag cctcccgagt agctgggatt acaggcacgc acacacccgg ctaatttttg tgttttttag tagagaggga 000320
000321 gtttcaccat gttggccaga ctggtcttga actcctcacc tgaagtgatt ggcctgcctt ggcctcccaa agtgctggga 000400
000401 ttacaggcat gagccactac acacggcttg agtacgggtt tcttctgtta taagaaagtg aaacccataa tgaaaatgca 000480
000481 tggtaaggta acataagaAG TCACGGTAAC AGGCAACTCT AGAATTAATT CATATGGAGA TGATG
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Predicted Small Protein

Name NONHSAT061228_smProtein_173:349
Length 59
Molecular weight 6827.7853
Aromaticity 0.172413793103
Instability index 72.8879310345
Isoelectric point 9.38055419922
Runs 9
Runs residual 0.0014209928003
Runs probability 0.0455259180749
Amino acid sequence MAGVKWRSLSSLQPPLPEFKRFSCLSLPSSWDYRHAHTRLIFVFFSREGVSPCWPDWS
Secondary structure LLLEEEELLLLLLLLLLLLLEEEELLLLLLLLHHHHLEEEEEEEEELLLLLLLLLLLL
PRMN -
PiMo -