NONHSAT062792

From LncRNAWiki
Revision as of 22:48, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT062792

Source

NONCODE4.0

Same with

,

Classification

sense

Length

924 nt

Genomic location

chr19-:16660642..16663144

Exon number

2

Exons

16660642..16661281,16662861..16663144

Genome context

Sequence
000001 GTTCCCACTG GTGATGCCTG TCTGACACGT TTTGGTATTT AGTAGGAAAT GAAGTGTTTC GAAGCTTCGA GAGAAGCTTC 000080
000081 AAAATTGTCA CAATTGCTGA AAACAGAATG AATCGTGAAC ATTATCTCAA TATTTTGTAT AATAGACAAG ACCACAGTGT 000160
000161 TTTGGTTCCC TGACCTGTTT TTGTGTTTAT GTTAGGATCT GAATCATGTT CTGGGTAAGG GGACGAGGAG CGAACACTGC 000240
000241 ACTAAGATTT GGTTTGCCAA ATCAGATTCT TTGGTCAAGA GTCAgcatga gccaccgtgc ccagccTGAT TGACAATGGC 000320
000321 CTCTTGAAGG CTGGGTTTTC CCAGCCGGAC AGTGCCCGCC CCACATGCTC CACTCCCACG CTTTCATCTG CAGGCCTGCC 000400
000401 TTCCTCTCAG CCACCTCACT GCTGAGCTCT GTGGTAGAGA ATTTCCTTTA CCCATCAGGG TATGGTCTGG CTGGTAATAC 000480
000481 TGACTCCAAC CCAGCTCCTT CATTTTATAG AAGGAGGCAT TTCTGAATCA TGTTTGTTCA CCATGGCGAG ACTCACTGCA 000560
000561 GAATTTTTAA CCACCTTATT TTAAGTCATT CATTCTAGGA ACAGTCAAGC CCCTACCACA AAGGGGCCAG ATCCGTTCAA 000640
000641 GTGAGGAAGC ACTTGCAGTT TCTGAATTTT GCTGTATATT TGTCCTATGT CACCCAACAG GCCCTTTGCT ATAGCTGGGA 000720
000721 CATTACCAGA CCCCAATACC TTAGGGTCTC ACAGCCTGAA GGACACAGAG CATTGAATTA TTAAAAGACC TGAAAATATT 000800
000801 ATAATGTTTT TCAATTGTCA CCTGTTTTCA AGACTTAAAT GCTATAGACT TTTCTGCAGG AATGACGTGT ATATTCCTCA 000880
000881 CTGGCATTTA CCAAAAATAA ATGATGGTTT CCAGGGAATC AAAA
[back to top]

Predicted Small Protein

Name NONHSAT062792_smProtein_461:583
Length 41
Molecular weight 4544.3987
Aromaticity 0.125
Instability index 50.8
Isoelectric point 4.74981689453
Runs 7
Runs residual 0.00302419354839
Runs probability 0.0203018144195
Amino acid sequence MVWLVILTPTQLLHFIEGGISESCLFTMARLTAEFLTTLF
Secondary structure LEEEEEELLHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHL
PRMN -
PiMo -