NONHSAT066228
Revision as of 22:56, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066228 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
575 nt |
Genomic location |
chr19-:39104683..39105513 |
Exon number |
3 |
Exons |
39104683..39104725,39104885..39104932,39105030..39105513 |
Genome context |
|
Sequence |
000001 ctcggctcat tgcaacctcc acctcctggg ttcaaacgat tctcctgcct cagcctcctg agtacttggg attacaggca 000080
000081 tgcaccacta tgcctggcta atttttgtat tttttagtag agatggggtt tcaccatgtt ggccaggctg gtctcggact 000160 000161 cctgacctca agtgatccac ccaccttggc ctcccaaagt gctgggatta taggcatgag ccactgcgcc aggccTATTG 000240 000241 GCCTCTTTTA TTTGCATTGC TGCCTCTTTC TGTCACTGAC CACCCCACCA TCTCCCCCTC CCACTGGTCC TATCCTATTT 000320 000321 CCCCTCTCCC TATGGCACCC TCTTAGCTGG TGTGGGGGGG CAGGACTCCC CAGCCCAGGT TCCCTGGCTC CCATCCAATG 000400 000401 CCTGGCCTGG CCGGGGTGAC CTTTGCAGTG ACAGGCTCCC TGTCAGAGCT CCAGATTAGC TATGTCTGCC GGGAAGTGCT 000480 000481 CCAGGGACTG GCCTATTTGC ACTCACAGAA GAAGATACAC AGGGACATCA AGGGAGCTAA CATCCTCATC AATGATGCTG 000560 000561 GGGAGGTCAG ATTGG |
Predicted Small Protein
Name | NONHSAT066228_smProtein_122:418 |
Length | 99 |
Molecular weight | 10082.7277 |
Aromaticity | 0.0816326530612 |
Instability index | 62.2021428571 |
Isoelectric point | 6.93194580078 |
Runs | 14 |
Runs residual | 0.00381460995613 |
Runs probability | 0.0301751331163 |
Amino acid sequence | MGFHHVGQAGLGLLTSSDPPTLASQSAGIIGMSHCARPIGLFYLHCCLFLSLTTPPSPPP TGPILFPLSLWHPLSWCGGAGLPSPGSLAPIQCLAWPG |
Secondary structure | LLLEEELLLLLLEELLLLLLLLLLLLLLEEEELLLLLLLLHHHHHHHEEEELLLLLLLLL LLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLEELLLL |
PRMN | - |
PiMo | - |