NONHSAT066614

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT066614

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2506 nt

Genomic location

chr19+:44124016..44126521

Exon number

1

Exons

44124016..44126521

Genome context

Sequence
000001 TTACAAAACT GGGATGCGCT GGGGGTGGAG GGCGCTAGTT CGGACTGGAT CCTGGGCCCG AGGCCTGCTT ATTTGCATAA 000080
000081 TCCTAGCGCG GGACAATGAA AGGCCTCCCG CACTGGAAGG AGTGATTTGC ATATTCCCCG GAGGGGCCTT ACTCCAGAGC 000160
000161 GCAGTGATTA GCATATGGCG GGGGCAACCT GAGCAAAGCG CATGCGCGCA GGGACTGCAG ACTGACGCGA AGTGGGTAGC 000240
000241 CTTGTCTTCG TAGGGGATCA GTTTGCATCC TGAGAGAGGG CACGAGGGCC AGGACCCCTC CCAACCAGGa taaaggttta 000320
000321 ttgatctcct aggtgtcagg ccccatgctg gcggattctg tggtttctgc agtgaaccat actcctgtac tcacggcacc 000400
000401 ccagtcgaag gagatacgca cctaattaga caactactac ccagaaggtc agacctggag tgaggaacac agggggctgt 000480
000481 gggagcctaa gaggcgcttg ccccggcctc tggttctaga aagacttcca ggaggtggtg atccttaagc caagtacgaa 000560
000561 taggagccaa ctagaatggg aatgggtctg gcagaatgaa ctgcaagcgc caaggcccag aggccaaaaa aaaaaaaaaa 000640
000641 aaaatagaag cgcatgtttt gattgaggaa gcaagagcag cttagtatgc ctagaaccta actggagacg ggaaatggTT 000720
000721 CTATAGACGA TGTTAGAGTT CAACTATGGC TACATTCCAG TCTTCCTGta agtgactttg tcacattctg gcttaaaact 000800
000801 cccccaaagg gatcccatta ggaaaaaaaa aaaatccaaa aatctttatc atggcctcag ggctatacac ctggtctggc 000880
000881 cgtgcttatc tttctgaccc cacctacttc ctcctccctc catttctgtc cagctccacc ttaccccaaa ctctttacca 000960
000961 gctcgggcct ctgctcttgc cgttccctcc gcctgaaaat gcttttccct ctgacctttg aatacctact cttgtgctca 001040
001041 ccattcatat cttggtacag atgtcaatct gagaggcttt tcctgatctc tccataatag cacTTACACA TTTGACtgga 001120
001121 gttatggata aatcgggatt ggccatgagt tggtggtggt tgtaactggc atgaagagta catggggctg ggcgcggtgg 001200
001201 ctcacgcccg taatcccagc actttgggag gccgaggctg gtgtatcacc tgaggtcagg agcttgagac cagcctgggc 001280
001281 aacatggtga aaccctgcct ctattaaaac tacaaaaatt agccaggggt tatggggggt gcctgtaatc cttgctactt 001360
001361 gggaggctga ggcacgaaga tcacttgaac cctggaggca gaggttgcat tgagtcgaga ttgagccact gcactccagc 001440
001441 ctgggccacc cagcgagact ctgggtctcg cctgtaatcc cagcactttg ggaggccgag gcgggcggat cacgtcagaa 001520
001521 gatcgagacc atcctggcca tcctagacca tttctactaa aaatacaaaa aaaaaaaaaa aaaaattagc cgggcgtggt 001600
001601 ggcaggcgcc tgtagtccca gctactcggg aggctgaggc aggagaatgg cgtgaacacg ggaggcggag cttgcagtga 001680
001681 tccgagatgg cgctactgca ctccagcctg ggcgacagag cgagacttgg tctcaaaaaa aagagtacat gggacgttat 001760
001761 tgtcctgtct actcctgtgg gtttgaagtt ttccataatG ACAATGGCAT ACCACATCAc catactctgc atttatatta 001840
001841 atagttctta tcacaatctg aactttcttt gcttccttgt tttgagtgtt ttcctcatga aagcttcatg agggtaagaa 001920
001921 tggagtcgcc ctttttcact ttgggttctc aatgcttaga gcagGATCAG ATTTCAGATT AGTGTAGCGC TGTCTTTAAC 002000
002001 ACTTAacatt tgcctgtttt attcaccatg gactctagaa ctttgagcag cacctggcac atcgtaagag gttatttttt 002080
002081 aaaGTTAGAA TAATACATCT AAAATGTACA TGAATGAATG AGAGGCCTGG GATGCCAGAC TAAAGAGCTT TGACTTGGTC 002160
002161 TAAAGGTGAT GGGGAGCTAG GCAAAGGTTT TGAGAGTTTA ACTTTAATTC AAAGTTCCCT TGGAGACTAA TGTCTGGGGT 002240
002241 AGGGGGAAGC CAGGGTAAGG GTCCGGGCCA TGGAATGGGG TAGCTCAGTC GCTATCAAAA AGACAAGACT GTGACTATTT 002320
002321 GGCTGAAGAA ATGGCCAAAC CCAGGTTTCT GGGGAGGTCG AGGTACCCTC AGTGAGGTCA GGACCTTCTC CTGGCCTATA 002400
002401 CTGTCCACCA GCAACCATCA CACTCCTCCC TCCCCTCTCC CTTAGTTCCC CTCCCAATGG TACAGCCCTT GACAGCAGGA 002480
002481 CAGACACACA GCCACCCCAA ACACTT
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Predicted Small Protein

Name NONHSAT066614_smProtein_998:1096
Length 33
Molecular weight 3914.6543
Aromaticity 0.21875
Instability index 65.153125
Isoelectric point 5.89276123047
Runs 7
Runs residual 0.0271045918367
Runs probability 0.0386100386101
Amino acid sequence MLFPLTFEYLLLCSPFISWYRCQSERLFLISP
Secondary structure LLLLHHHHHHHHLLLLLLHHHHLLLLLEEELL
PRMN -
PiMo -