NONHSAT066644
Revision as of 22:58, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066644 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
568 nt |
Genomic location |
chr19-:44434109..44439430 |
Exon number |
5 |
Exons |
44434109..44434152,44435399..44435517,44436756..44436842,44438578..44438846,44439382..44439430 |
Genome context |
|
Sequence |
000001 ACTTCCGCGG CAAGAGGTTG AGAGCGCGGC CTTCATTCCT CTCGTGGAAG AAAGGAGGCT GTTCTTGGAC TATGCCTGAC 000080
000081 CCGTTTTTTA AGAAAGAGTG CATCACTCAA CAGGTGGCGT CTGGAGTTAT CCTCTGTGGA TTTTCCAGGA TCTCAGACAA 000160 000161 GATCGTGCAA TCTCCCAGCC TCCTTTCCTT CCCCTGCCCT GACTTCTGAA AGAATGCTGC GGGAGAGGAG GAAGGAGAGC 000240 000241 ATCCTGGCTT CTGGCAGCAG AGCCCCACTG TGACAGGACC TAGCATTCAC CTTCCTCTTC TGTTCCGAGT GCGAGAAGAC 000320 000321 TTCAGGGACC TCTGTTTCAT GGACATTATC ATATTCTTCT CAAGAGTACC CAGCAAGAGG TTTGCAAAGA GGAGTTATTC 000400 000401 AGTGAagacg gggtttcacc atcttggcta ggctggtctt gaattcctga cctcgtgatc cacccgcctg ggcctcccaa 000480 000481 agtgctggga ttacatgcgt gagccaccgt gcccagccTC AAAGcagcaa aaatggacta agacaTCACT TGAACTGGCA 000560 000561 ggaggtgg |
Predicted Small Protein
Name | NONHSAT066644_smProtein_71:208 |
Length | 46 |
Molecular weight | 4977.7958 |
Aromaticity | 0.111111111111 |
Instability index | 59.7422222222 |
Isoelectric point | 5.91253662109 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0213853559442 |
Amino acid sequence | MPDPFFKKECITQQVASGVILCGFSRISDKIVQSPSLLSFPCPDF |
Secondary structure | LLLLLLLLLLEEHHHLLLEEEEEEEEEELLEEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |