NONHSAT066918
Revision as of 22:59, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066918 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
556 nt |
Genomic location |
chr19-:47231942..47235045 |
Exon number |
3 |
Exons |
47231942..47232034,47233989..47234130,47234725..47235045 |
Genome context |
|
Sequence |
000001 agaggctgga gggaggaaca ggaggaggaa gctgagaaag aggctgagcc tgtgcggcgt gtcagtgtcg ttgtgggagg 000080
000081 aaggccggtg agaatggagt cctgtgtccc gctgcaagtg cagcgagtgt tctgaggatg gagtgGAGCT CTGGTGATGG 000160 000161 CAGCCGTGAG GCGAGAGGGT ACATCTGCAG TGACCTCTGC ACCCGTTGGT AACTGGCAGT TGACAAGACC TCCAGGGCAT 000240 000241 CAACCTGATG GCAGAAAGGG GGGACGTTTT CGTCGATCTG CACTTGGAAT TGCACCCTGC CTTCTCCCGC AGTCAGGCTG 000320 000321 GGAACGCGGC AGGCAAAGAT GGCAAAGAGC GCTTGGGCGG CTCAGTGCTG GGGCAGATCC CCTTCCTGCA GAACTGCGAG 000400 000401 GACGAAGACA GCGACGAGGA CGATGAGCTG GACAGCGTGC AGCACAAGAA GCAGCGTGTG AAGCTCCCAT CCAAGGCTCT 000480 000481 GGTGCCCGAA ATGGAAGACG AGGATGAGGA AGACGACTCT GAGGATGCTA TCAATGAGTT TGATTTCCTG GGCTCA |
Predicted Small Protein
Name | NONHSAT066918_smProtein_338:460 |
Length | 41 |
Molecular weight | 4381.9792 |
Aromaticity | 0.075 |
Instability index | 79.4675 |
Isoelectric point | 11.440612793 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0275443510738 |
Amino acid sequence | MAKSAWAAQCWGRSPSCRTARTKTATRTMSWTACSTRSSV |
Secondary structure | LLHHHHHHHHLLLLLLLLLLLLEELLEEEEEEEEEELLLL |
PRMN | - |
PiMo | - |