NONHSAT067086
Revision as of 23:00, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067086 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
764 nt |
Genomic location |
chr19-:49120415..49122441 |
Exon number |
2 |
Exons |
49120415..49121134,49122398..49122441 |
Genome context |
|
Sequence |
000001 CGTTCTCTCT TTCCGGACCT GGCCGAGCAG GAGGCGCCAT CATGGGAGTG GACATCCGCC ATAACAAGGA CCGAAAGGTT 000080
000081 CGGCGCAAGG AGCCCAAGAG CCAGGATATC TACCTGAGGC TGTTGGTCAA GGTGAGGCTG GGCCCTGAGG TCTTTGGGAA 000160 000161 GGGTCACCCC AGGTCTGACT TGCAGATCCT CCATTCTAGT GCTGGCACCA AGCTCCTCCC AGGGGCCTGC AGAGCAGTCT 000240 000241 CGGGTCTCTG GTTCTGTTCC AGGGTCTCCT GCATTTGTAT TTTCAGCCTC TAGGCTGTGT ACAGCTCGGG AGTGGAGCCA 000320 000321 GGATTTTCTA GGTCCTTGGC CAGGAAGGAC CTGGGCCAGC TTTCTCCCTC TAGGTCGGTG GGTTGGGGGA AAGGGATAAA 000400 000401 GATTATTTTA GTCCAGATCA TCATGTGTTT GCCCCTTCAC TGGAAGGCTG CGGGGGAGCA GGCTGTCCCA GCTTCTCACT 000480 000481 GTCTTCCCGT CCCTCCAGTT ATACAGGTTT CTGGCCAGAA GAACCAACTC CACATTCAAC CAGGTTGTGT TGAAGAGGTT 000560 000561 GTTTATGAGT CGCACCAACC GGCCGCCTCT GTCCCTTTCC CGGATGGTGA GTGGCTGGTC CAGAGAGCAC GGTAGACCTG 000640 000641 GGAGCCGCTG GGTCTTGTCT GTCTGGAAGG GAGGCAGGAC TTGGAGCTCT GGGAGCAACC AGGGCATCAA GGGTTTGTCT 000720 000721 CAGCCAGTCG CGAGCGTAGA GCTTGGACTG TTGGTTGGAA CTGA |
Predicted Small Protein
Name | NONHSAT067086_smProtein_41:292 |
Length | 84 |
Molecular weight | 9345.9782 |
Aromaticity | 0.0602409638554 |
Instability index | 55.2795180723 |
Isoelectric point | 10.2373657227 |
Runs | 17 |
Runs residual | 0.0647925033467 |
Runs probability | 0.0312457786506 |
Amino acid sequence | MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKVRLGPEVFGKGHPRSDLQILHSSAGTKLLP GACRAVSGLWFCSRVSCICIFSL |
Secondary structure | LLLEEELLLLLLLLLLLLLLLLLEELLEEEEEELLEEELLLLLLLLLLEEELLLLLLLLL HHHHHHLLEEEEELEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiTTTTTTTTTTTTTTTTTTo |