NONHSAT067242
Revision as of 23:01, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067242 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
651 nt |
Genomic location |
chr19+:50215976..50216981 |
Exon number |
2 |
Exons |
50215976..50216321,50216677..50216981 |
Genome context |
|
Sequence |
000001 TGGGCTCCTG TCCTCAGGTC CATTCGGAGC AGTGGCAGCT GTCCACCAGC CAGATCCCTG TTCAGCAAAT GCATCTGTTT 000080
000081 GACGTCCACA ATTACCCGGA CTATGTTTCC TCAGGCGGTG GATTCGGGCC TGTGAGTGGA GCTGGGCGCG CTGGCCCCCA 000160 000161 GAGGAAAGAG GGGGCTGGGG GGCCTGCACT CCTGCATAGT GGGGGTGGAG GGGACCGGAG CTATTTTCTT CCCTTCACTC 000240 000241 TTTCCGTCTC CAGGCTGATG ACCATGGTTA TGGTGTTTCT TATATCTTCA TGGGGGATGG CATGATCACC TTCCACATCT 000320 000321 CCAGCAAAAA ATCAAGCACA AAAACGGATT CCCACAGGCT GGGGCAGCAC ATTGAGGACG CACTGCTGGA TGTGGCCTCC 000400 000401 CTGTTCCAGG CGGGACAGCA TTTTAAGCGC CGGTTCAGAG GGTCAGGGAA GGAGAACTCC AGGCACAGGT GTGGATTTCT 000480 000481 CTCCCGCCAG ACTGGGGCCT CCAAGGCCTC AATGACATCC ACCGACTTCT GACTCCTTCC AGCAGGCAGC TGGCCTCTCC 000560 000561 AAGGAATAAG GGTGAAATTG CCACAGCTGG CTGACACAGG ACAGGGGCAA CTGGTTTGGC AACCCCACAT CCAGGCCAAT 000640 000641 AAAGATGTGT G |
Predicted Small Protein
Name | NONHSAT067242_smProtein_68:304 |
Length | 79 |
Molecular weight | 8149.2201 |
Aromaticity | 0.115384615385 |
Instability index | 54.0679487179 |
Isoelectric point | 8.24688720703 |
Runs | 13 |
Runs residual | 0.0329893683552 |
Runs probability | 0.0516625222508 |
Amino acid sequence | MHLFDVHNYPDYVSSGGGFGPVSGAGRAGPQRKEGAGGPALLHSGGGGDRSYFLPFTLSV SRLMTMVMVFLISSWGMA |
Secondary structure | LEEEEELLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLEEEEEEEEEE HHHEEEEELEEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHH HHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTT TTTTTTTTTTTTTooooo |