NONHSAT068150
Revision as of 23:07, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068150 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
656 nt |
Genomic location |
chr19+:56915699..56925762 |
Exon number |
3 |
Exons |
56915699..56915821,56918395..56918492,56925328..56925762 |
Genome context |
|
Sequence |
000001 CTAGGGCTGC GGCGCCTTTG TGAGCGCGGC CGCCGGCCAG GATCGAGCCC TGGCCCGGGC CCTGGCCCAG CCCCGGCCTC 000080
000081 CAAGGACCGC GCCGAAGGAG GTGCCCACTG GAGGGAGGAG GCGCTCGACT TTCTCAGGAT ACTGTCCCTC TCCCACAGAG 000160 000161 GAGCTGAAGG AGTAGGACAG AAGAACTGTC AAATTCTGGA ATCCTTAAAG CCATGTCCAA GGATTTGGTG ACATTTGGGG 000240 000241 ATGTGGCTGT AAATTTCTCT CAAGAGGAAT GGGAATGGCT GAACCCTGCT CAGAGGAATT TGTACAGGAA AGTGATGTTG 000320 000321 GAGAACTACA GGAGCTTGGT ATCATTGGGT AAGGACATGT CCCCTTAATT CAGAATCTGT ACATGGGACT GAGCTCCAAT 000400 000401 GTAATATTTG GGAAACCTCT GACGTGCTTC ACTAAATTTC CTTTTCTTGT GCTTCCCAAA ATAGGTTGAA TTTGTAGAAT 000480 000481 TGGCAGCTTC ATCTTCCCCA TTCTTATTCC TCAGCTCCCT CCCATTATTC TCCCACCTTC TTGATGATGC AGAAACTTGA 000560 000561 TCTTATTTAT AGACCTGCCT AATTCCCCTT TTGTTTTTTG TAAGCAGGAG TTTCTGTTTC TAAGCCAGAT GTGATCTCAT 000640 000641 TATTGGAGCA AGGAAA |
Predicted Small Protein
Name | NONHSAT068150_smProtein_212:367 |
Length | 52 |
Molecular weight | 5993.7579 |
Aromaticity | 0.117647058824 |
Instability index | 48.2156862745 |
Isoelectric point | 5.09600830078 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0293234410881 |
Amino acid sequence | MSKDLVTFGDVAVNFSQEEWEWLNPAQRNLYRKVMLENYRSLVSLGKDMSP |
Secondary structure | LLLLEEEELLEEELLLHHHHHHHLHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |