NONHSAT068786
Revision as of 23:10, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT068786 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
627 nt |
Genomic location |
chr2-:4655665..4668820 |
Exon number |
2 |
Exons |
4655665..4655855,4668385..4668820 |
Genome context |
|
Sequence |
000001 TTTTTATGGC TGCATAGTAT TCCATGGTGT ATATGTGCCA CATTTTCTTA ATCCAGTCTA TCGTTGTTGG ACATTTAGGT 000080
000081 TGGTTCCAAG TCTTTGCTAT TGTGAATAGT GCCGCAATAA ACATATGTGT GCATGTGTCT TTATAGCAGC ATGATATTAA 000160 000161 ATACCATGAA AATGTACATA GTTGTTTTAG TGGATATCCC CAAAAATATA ATGTGGTACC AATTCCCAAA GTCTAGATCC 000240 000241 CTGGAAATTT GAATAGGATG CTTTACAATA ACTAGATAGG ATCTTTTATC TTAAGAAATT GTATAGAAAA TATTTGTTGA 000320 000321 AAGATATACA TTCAGTGAAC AGAATAAAAT CAAGAACACT TGGTGCTTTG AAAACCATGT CACGGCTGGG CGCGGTGGCT 000400 000401 CACGCCTGTA ATCCCAGCAC TTTGGGAGGC TGATGATTTT GCTTAGTTAC ATTCTTAAAA CTCCCAATCA TAAACAAGAA 000480 000481 ATACATGTAA TTAAAATTTA GATAATAATA TTTAAGACGG TTGTTATAAA GAACAACTAT ATTACATAAA ATATTAAATT 000560 000561 ATACATTATT AGATAAATAC ATTTTTATTA TGTCAATCAG GATTTAGATT TATCACTATT ACCTACT |
Predicted Small Protein
Name | NONHSAT068786_smProtein_23:145 |
Length | 41 |
Molecular weight | 4474.3827 |
Aromaticity | 0.125 |
Instability index | 52.9025 |
Isoelectric point | 6.79632568359 |
Runs | 9 |
Runs residual | 0.0469758064516 |
Runs probability | 0.0239160729357 |
Amino acid sequence | MVYMCHIFLIQSIVVGHLGWFQVFAIVNSAAINICVHVSL |
Secondary structure | LEEEHHHHHHHHHHHHLLLHHHHHHLHHHHHHEEEEEELL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiii |