NONHSAT069714

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT069714

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3137 nt

Genomic location

chr2-:27252115..27255251

Exon number

1

Exons

27252115..27255251

Genome context

Sequence
000001 cccggccACT GTTTTTCTTT CCTTTCTCGT AGAGCTGGAA GGATGGAAGG GAAGTAGTGC TCCTCATATC TAGGGAGAGA 000080
000081 TTGAAGATTA AATGCTTCCT TCCTTCTAGG AAAGTGCTGG CTTTACTGTT GCTAGTGATT AAACCTCGGG TTTAATGGGC 000160
000161 TATACAAATC TATTGCCAAA GAACAAGGAA GAGGATGGGG GCTTGAGGAA AGGGCAGAGT GTTGGGGAGC TGGGGTAGGA 000240
000241 GGTGGAGAAT GGAGAATAAt tttttttttt ttttttgaga caggatcttg ctttgtcgcc caggctggag ttcagtggcg 000320
000321 cgatcacgac tcactgcagc ctcaacttct agggctcagg tgatccccca ccacggatca cctgacccac caccaccccc 000400
000401 ggctaatctt tggtattttt tgtagagact gggttttgct gtgttgccca ggctgatctc aaactcctgg gctcagtgat 000480
000481 ccaccctctt cagcctccca aagtgctggg attacaggag tgagccaccg ctcctggccT CTGAGTTCTT CTCATGGGAG 000560
000561 GCTGAGAAAA GTCTGGGGGT CTGGGACAGC CAGGGCCGGG TTTCCCCTTC CAGGCAATGA GAAAGAACAG GCTCTGCCTC 000640
000641 CCACCATAAG AGTCAATCCC AAGTTCCAGA TGTGTCAGGG AAGCGATGGA GAGCCCCAGA CTTGAGGCAT CTGCAGACAG 000720
000721 GTTCCTGCTC AGACATCCAC GTGGAGGGTG TTAGTATCCT GGGAGCCTTC AGAACCTTGA AGCATGccag cagaggagaa 000800
000801 tgagggaaga taaaatcaaa gtgacttatc acaattaagg aaatgtgcta tttcatgtac aactgtgtgt gaggatgaga 000880
000881 ttcctacctg ccataCTGAG GTATTATGAT AAGAACTAAG AGAGTCCAAA TTCCTACAGG ATGAACAGCT GAGGGAGCGA 000960
000961 TGCATTCCTT AGGAAGGAGT TTAGCTTCCC GAAGGAGACG GCAGCTGAGA TAGGTTCTGA GAAATAGCAT TTTCATTGGT 001040
001041 TCCccgggcg ccgtggctca cgcctgtaat cccagcactt cgggaggccg aggtgggtat cacctgaggt caggagttcg 001120
001121 aaaccagtca ggccaacatg gtgaaacccc atctctacta aatacaaaaa agtagccagg tatgatggcg caggcctata 001200
001201 atctcagcta cttgggaggc tgaggcagga gaatcgcttg aaccttggag gcggaggttg cagtgagccg agattgtgcc 001280
001281 actgcactcc aacctgggca acaagagcta aactccgtct caaaaaaccc aaaacaacaa caacaacaaa aaaCAAAATT 001360
001361 GAATGTTCAC TGGCTGAGGG TTAGGGTGGG TGGAGAGAAA ATGCCAGTTG TGTGGATCTG TTGATGTAAA ACAAAGGCCT 001440
001441 AGAGGGTGGT AAACTGGAAG CAGTTCAATG GGACAGTGCT TGATGGGACT TTGGAGGTGA TGAGGTTtga tatagtttgg 001520
001521 atttttgtcc ctgcccaagt ctcatgttga attgtaatcc ccagcgctgg cagttgggcc tggtgggaag tgtttggatc 001600
001601 atggtggtgg atccctcatg gtggatccca gttctcatga gatctggtca tttaaaagtg tgtggcacct ccccaccacc 001680
001681 tctctctctc gctcgcttgc tcgctcctgc ttttaccatg tgatgtgcct gctccccctt tgccttccgc catgattgta 001760
001761 agcttcctga ggcttcccta gaagcagatg tcagcattat gcttcctata cagtctgcag aactgtgagc caattaaact 001840
001841 tcttttctta taaattaccc agtctagatg tttctttata gcaatgcaac aatagcctCT TATGAGTTTG GAAAGGGATC 001920
001921 TGAGCCCATA TGCCAAGGAA CTTGCCTGCC AAATCTGGAC TTTATCCTTC AGGCCCTGGG AGACCAGTGA GAGGGTGGCA 002000
002001 TAATCCACTC TTTTGGAAGG GTAAATGTGG CTGTGTGAAG TGTTGGTAGG GGAAGGCAGG GGGTGGGAGA TGAGCATATC 002080
002081 TTGCTGCCTC CTTCTACCTG TCCTCCAGCC CCCTTAGGCC TGACCATGGC TGACTTTGCA TCCGGTAGCT CTGAGATACA 002160
002161 GTGCCTTTGC CAAGGACCAT ATTTGAACTG ATCATTAATC AATTCATTTT GCAGATCATT GGTTTAGGTG TACTCAGGAG 002240
002241 ACCAACAACA ATATCTTCTC TTTGTTTGAC CCCTCCTGTG TCACATGTAT GATCACAGAA GAGACCATGT TTTTGGAAGA 002320
002321 GAAACAGAAC TGGCTTTCCA TTGAGGCAAA TGAGGGGGCT GCCCCATGGT GGAGACACAC AGAAGGGTGG GAGAGGGACT 002400
002401 CTATCTTTCA TTGGAATAGT CTAGTAAGTT ACCAGTTCTA ACTTGGCATC TAGGACATAT AAATCATGCa tttacttatc 002480
002481 cagcaacctt ttctaagcac cttctctgtg tcaggccctg tgctaggtgg agctggaaga tatagctcac ttgcttgtaa 002560
002561 ggaacttgaa gtctgtgtgg gggacaaatg tataaacaga aaattacagt tcaccatctt agtgttccag aggaaagaag 002640
002641 cacttagtat gaggtaccag gaagaggtgg ggagaaggga gtgGCTTTAC ATCCTTAAGT TCTGGGTGTT TGAAGAGCAG 002720
002721 CCTTAGACAC TAGCCACGGA GGTGGGCTTG GGTAGGCCCC GCCGTGGGGT TTGAAGACCC AAAAGATGTT GGGTCAAGGA 002800
002801 GGACATGGGT GTCTAGTGTG GGAGCAAGCA GAAGGGTGAG CTCACCGAAG CACTGTTTTA CCCACtgtac tacgtttcta 002880
002881 ttgctgctaa aacaaattgc cacaaactta gtggcttaaa acaagggcgt tatcttccag ttctggaggg caggagtcta 002960
002961 actcaggtct ccctgggcta gaatcgaggt gtcagcaggg ctgggttcct ttctggaggc tttgggggag catccatttc 003040
003041 cttgccttgc ccagcttcta gaggccacct gcattcctga gttcatggct cccttctgtc ttcaaagcca acaacagtgg 003120
003121 gtgagtcact ctcacat
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Predicted Small Protein

Name NONHSAT069714_smProtein_2465:2725
Length 87
Molecular weight 10043.6501
Aromaticity 0.127906976744
Instability index 53.3441860465
Isoelectric point 8.53436279297
Runs 16
Runs residual 0.0464248524818
Runs probability 0.0457350733086
Amino acid sequence MHLLIQQPFLSTFSVSGPVLGGAGRYSSLACKELEVCVGDKCINRKLQFTILVFQRKEAL
SMRYQEEVGRREWLYILKFWVFEEQP
Secondary structure LEEEEELLLEEEEEELLLLLLLLLLLLHHHLLEEEEEELLLEELLLLLEEEEEEEHHHHH
HHHHHHHHLHHHHHHHHHHHHHLLLL
PRMN -
PiMo -