NONHSAT069978
Revision as of 23:15, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069978 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
578 nt |
Genomic location |
chr2+:32727927..32730422 |
Exon number |
3 |
Exons |
32727927..32727958,32728109..32728303,32730072..32730422 |
Genome context |
|
Sequence |
000001 TAGTGATGCC TTGAAAGCAT TTCATGATAT GGGTGGTGTT CAGCTCATAT GCAATAATAT GGTTACTAGT ACAAGGGCTA 000080
000081 TTGTGAACAC TGCAAGAAGT ATGGTATCAA CTATTATGAA ATTTCTTGAC TCTGGTCCAA ATAAAGCTGT TGACAGCACA 000160 000161 TTGAAAACAA GAATACTAGC TTCTGAGCCT GACAATGCTG AAGGGATTCA TAACTTTGCA CCCCTCGGTA CAATCACATC 000240 000241 TAGCAGTCCT ACTGCCCAAC CAGCTGAAGT GCTATTGCAG GCCACACCTC CTCACAGAAG AGCTCGCTCT GCTGCTTGGT 000320 000321 CCTACATCTT TCTTCCAGAG GAGGCTTGGT GTGACCTTAC CATTCACCTT CCTGCAGCAG TGCTGCTTAA GGAGATACAT 000400 000401 ATCCAGCCTC ATCTTGCATC TCTTGCAAGT GAGTAATATT TTATAAAGAA GCATCATGAG AACAAGCTTT AATTTAGAAA 000480 000481 TATTTGAAAA TAAAAATGTT TAGTAAGCGG AAATACACTT AGGTGTGATT ACCAGAGAGT GTAACTTCTG AACAGTTTTT 000560 000561 ATTGAAATAA TTAATACT |
Predicted Small Protein
Name | NONHSAT069978_smProtein_194:445 |
Length | 84 |
Molecular weight | 9517.37 |
Aromaticity | 0.0843373493976 |
Instability index | 67.313253012 |
Isoelectric point | 9.49664306641 |
Runs | 13 |
Runs residual | 0.0165997322624 |
Runs probability | 0.0279646161999 |
Amino acid sequence | MLKGFITLHPSVQSHLAVLLPNQLKCYCRPHLLTEELALLLGPTSFFQRRLGVTLPFTFL QQCCLRRYISSLILHLLQVSNIL |
Secondary structure | LLLLEEELLLLHHHHHHHHLLLHHHHLLLLLLHHHHHHHHLLLLHHHHHHLLLLLLHHHH HHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |